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scnpilot_expt_750_bf_scaffold_9809_5

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_66_490

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(3850..4149)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ED53C similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 94.0
  • Bit_score: 181
  • Evalue 4.00e-43
trbD1; conjugal transfer protein TrbD similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 167
  • Evalue 1.70e-39
Conjugal transfer protein TrbD {ECO:0000313|EMBL:CAP42551.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petr similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 167
  • Evalue 8.40e-39

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAACGCGGCTGGCATGAATGCGCCAACCACTAATACAGCGAGCTTCGCGAATGGCTTCGAGATTCCGCTGCATCGCTCGCTGACCGAACCGATTCTGCTGGGTGGCGCGCCGCGCACCGTGGCGATTGCCAACGGCACGCTGGCCGCGGCCGTTGGGCTCGGGCTGCAACTCTGGTTGCCCGGCATGGTGCTGTGGATCGTCGGGCACTCGCTGGCCGTGTGGGGCGCGCGAGTGGATGCGCAGTTCATGGCGGTCTTCGCTCGGCACATCAAGCACCGGCAGTTGCTGGACGTGTGA
PROTEIN sequence
Length: 100
MNAAGMNAPTTNTASFANGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWLPGMVLWIVGHSLAVWGARVDAQFMAVFARHIKHRQLLDV*