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scnpilot_expt_750_bf_scaffold_9809

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_9809_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..483)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003826C00
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
conjugal transfer protein TrbL
scnpilot_expt_750_bf_scaffold_9809_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(487..750)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000370D5A2
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_9809_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(760..1488)
DNA (729bp) protein (243aa)
conjugal transfer protein TrbJ n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0BFB rbh
conjugal transfer protein TrbJ Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
conjugal transfer protein TrbJ
scnpilot_expt_750_bf_scaffold_9809_4
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1485..3839)
DNA (2355bp) protein (785aa)
conjugal transfer protein TrbE n=1 Tax=Cupriavidus sp. WS RepID=UPI0003737207
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 Tax=DS1215_Halomonas_54_146
conjugal transfer ATPase TrbE
scnpilot_expt_750_bf_scaffold_9809_5
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3850..4149)
DNA (300bp) protein (100aa)
conjugal transfer protein TrbD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ED53C
trbD1; conjugal transfer protein TrbD
Conjugal transfer protein TrbD {ECO:0000313|EMBL:CAP42551.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petr
scnpilot_expt_750_bf_scaffold_9809_6
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4146..4352)
DNA (207bp) protein (69aa)
Conjugal transfer protein TrbC n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZA3_PSEMN
conjugal transfer protein Trbc
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AEF22100.1}; Flags: Precursor;; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
Displaying 6 items

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