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scnpilot_expt_750_bf_scaffold_9809_6

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_66_490

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(4146..4352)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZA3_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 124
  • Evalue 3.10e-26
conjugal transfer protein Trbc similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 124
  • Evalue 8.60e-27
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AEF22100.1}; Flags: Precursor;; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 124
  • Evalue 4.30e-26

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Taxonomy

Pseudomonas fulva → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
TCCCTGCTGGACTCGATCCAGGGGCCGGTGGCCAGGATCATCGCGGTGATCATCATCATTACCACCGGCTTGACGCTGGCGTTCGGCGACACCAGCGGAGGCTTTCGCAAGCTGGTGCAGATCGTGTTCGGCCTGTCGATCGCGTTCGCCGCATCGTCGTTCTTCCTGACCTTCTTCAGCTTCACGGGTGGAGCGGTGATCGCATGA
PROTEIN sequence
Length: 69
SLLDSIQGPVARIIAVIIIITTGLTLAFGDTSGGFRKLVQIVFGLSIAFAASSFFLTFFSFTGGAVIA*