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scnpilot_expt_750_bf_scaffold_291

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_291_59
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58811..59770
DNA (960bp) protein (320aa)
Phosphate starvation-inducible ATPase PhoH with RNA binding motif n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHB6_9PROT rbh
Phosphate starvation-inducible ATPase PhoH with RNA binding motif {ECO:0000313|EMBL:CCU61862.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadacea
PhoH-like protein
scnpilot_expt_750_bf_scaffold_291_60
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59730..60290
DNA (561bp) protein (187aa)
Endoribonuclease YbeY n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHM4_9PROT
Endoribonuclease YbeY {ECO:0000313|EMBL:AKH38030.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas commun
hypothetical protein
scnpilot_expt_750_bf_scaffold_291_61
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60569..61429
DNA (861bp) protein (287aa)
Magnesium and cobalt efflux protein CorC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH60_9PROT rbh
Cation transporter {ECO:0000313|EMBL:KIO48799.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.
transporter-associated protein
scnpilot_expt_750_bf_scaffold_291_62
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61520..61975
DNA (456bp) protein (152aa)
Inorganic pyrophosphatase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLQ5_ACCPU
Inorganic pyrophosphatase {ECO:0000313|EMBL:KIO48839.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp
Inorganic pyrophosphatase
scnpilot_expt_750_bf_scaffold_291_63
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62077..64017
DNA (1941bp) protein (647aa)
COG0488: ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR07_9PROT rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIO48798.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitro
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_291_64
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64095..64421
DNA (327bp) protein (109aa)
Cytochrome c4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFF0_9PROT
Cytochrome C {ECO:0000313|EMBL:KIO48797.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c, class I
scnpilot_expt_750_bf_scaffold_291_65
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64448..64774
DNA (327bp) protein (109aa)
Cytochrome c4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHC0_9PROT
Cytochrome C {ECO:0000313|EMBL:KIO48796.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c, class I
scnpilot_expt_750_bf_scaffold_291_66
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64885..65247)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GD05_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ03156.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp.
scnpilot_expt_750_bf_scaffold_291_67
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65320..65991)
DNA (672bp) protein (224aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH62_9PROT rbh
endonuclease III
scnpilot_expt_750_bf_scaffold_291_68
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66021..66764)
DNA (744bp) protein (248aa)
Electron transport complex protein RnfB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR12_9PROT
Ferredoxin {ECO:0000313|EMBL:KIO48793.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RnfABCDGE type electron transport complex subunit B
scnpilot_expt_750_bf_scaffold_291_69
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66761..67816)
DNA (1056bp) protein (352aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFF2_9PROT rbh
scnpilot_expt_750_bf_scaffold_291_70
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

67958..68893
DNA (936bp) protein (312aa)
Kinesin light chain n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5H7_NITMU rbh
kinesin light chain
Tfp pilus assembly protein PilF Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
scnpilot_expt_750_bf_scaffold_291_71
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68939..69691)
DNA (753bp) protein (251aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ATE_NITMU rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
scnpilot_expt_750_bf_scaffold_291_72
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69675..70373)
DNA (699bp) protein (233aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH67_9PROT rbh
scnpilot_expt_750_bf_scaffold_291_73
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70387..71073)
DNA (687bp) protein (229aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR15_9PROT rbh
ExsB
scnpilot_expt_750_bf_scaffold_291_74
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71160..71816)
DNA (657bp) protein (219aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFF4_9PROT rbh
radical SAM family protein
scnpilot_expt_750_bf_scaffold_291_75
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71919..72785)
DNA (867bp) protein (289aa)
TPR repeat containing exported protein Putative periplasmic protein contains a protein prenylyltransferase domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHC7_9PROT rbh
Protein prenylyltransferase {ECO:0000313|EMBL:KIO48836.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira
hypothetical protein
scnpilot_expt_750_bf_scaffold_291_76
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72789..73307)
DNA (519bp) protein (173aa)
18K peptidoglycan-associated outer membrane lipoprotein Peptidoglycan-associated lipoprotein Outer membrane protein P6 OmpA/MotB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHN3_9PROT
Peptidoglycan-binding protein {ECO:0000313|EMBL:KIO48788.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
OmpA/MotB
scnpilot_expt_750_bf_scaffold_291_77
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73348..74646)
DNA (1299bp) protein (433aa)
Protein TolB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH71_9PROT rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitro
tolB; translocation protein TolB
scnpilot_expt_750_bf_scaffold_291_78
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74696..75580)
DNA (885bp) protein (295aa)
TolA protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR20_9PROT rbh
Cell envelope protein TolA {ECO:0000313|EMBL:KIO48835.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira s
TonB-like protein
scnpilot_expt_750_bf_scaffold_291_79
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75607..76023)
DNA (417bp) protein (139aa)
Tol biopolymer transport system, TolR protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFF6_9PROT
Tol biopolymer transport system, TolR protein {ECO:0000313|EMBL:CCU61881.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" s
biopolymer transport protein ExbD/TolR
scnpilot_expt_750_bf_scaffold_291_80
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76093..76779)
DNA (687bp) protein (229aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHC8_9PROT rbh
Protein tolQ {ECO:0000313|EMBL:KIO48786.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
MotA/TolQ/ExbB proton channel
scnpilot_expt_750_bf_scaffold_291_81
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76776..77216)
DNA (441bp) protein (147aa)
4-hydroxybenzoyl-CoA thioesterase family active site n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHN7_9PROT
4-hydroxybenzoyl-CoA thioesterase family active site {ECO:0000313|EMBL:CCU61883.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospi
4-hydroxybenzoyl-CoA thioesterase
scnpilot_expt_750_bf_scaffold_291_82
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77308..78372)
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR26_9PROT rbh
scnpilot_expt_750_bf_scaffold_291_83
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78521..79123)
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RUVA_NITMU rbh
ruvA; Holliday junction DNA helicase RuvA
scnpilot_expt_750_bf_scaffold_291_84
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79120..79689)
DNA (570bp) protein (190aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD2_9PROT
Crossover junction endodeoxyribonuclease ruvC
scnpilot_expt_750_bf_scaffold_291_85
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79693..80418)
DNA (726bp) protein (242aa)
Probable transcriptional regulatory protein EBAPG3_9170 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP1_9PROT rbh
Probable transcriptional regulatory protein SQ11_09615 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitros
hypothetical protein
scnpilot_expt_750_bf_scaffold_291_86
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80546..81667)
DNA (1122bp) protein (374aa)
Glycine oxidase ThiO {ECO:0000313|EMBL:CCU61889.1}; EC=1.4.3.19 {ECO:0000313|EMBL:CCU61889.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae
Glycine oxidase ThiO n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH78_9PROT rbh
FAD dependent oxidoreductase
scnpilot_expt_750_bf_scaffold_291_trna_2
unknown

Not on your lists

81816..81888
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_291_87
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82501..84054
DNA (1554bp) protein (518aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JS27_9GAMM rbh
HsdR family type I site-specific deoxyribonuclease
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AEM46535.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidi
Displaying items 61-90 of 108 in total

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