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scnpilot_expt_750_bf_scaffold_5116

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_5116_1
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..729
DNA (729bp) protein (243aa)
Phytoene desaturase n=1 Tax=Galbibacter marinus RepID=K2QGR7_9FLAO
Phytoene desaturase {ECO:0000313|EMBL:EKF53892.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
phytoene desaturase
scnpilot_expt_750_bf_scaffold_5116_2
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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734..1570
DNA (837bp) protein (279aa)
phytoene synthase (EC:2.5.1.32)
Phytoene synthase {ECO:0000313|EMBL:ADY52770.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ADY52770.1};; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sph
Phytoene synthase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBS9_PEDSD rbh
scnpilot_expt_750_bf_scaffold_5116_3
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1580..2038
DNA (459bp) protein (153aa)
Fatty acid hydroxylase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBT2_PEDSD
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:ADY52773.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedoba
scnpilot_expt_750_bf_scaffold_5116_4
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2025..2693
DNA (669bp) protein (223aa)
Lycopene cyclase n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HHW9_9SPHI
Lycopene cyclase {ECO:0000313|EMBL:ERJ61356.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium
lycopene cyclase domain-containing protein
scnpilot_expt_750_bf_scaffold_5116_5
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2762..3640)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PVW2_ELIME rbh
Proline dehydrogenase {ECO:0000313|EMBL:CDN76309.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia ano
hypothetical protein
scnpilot_expt_750_bf_scaffold_5116_6
unknown

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comp(3691..4038)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375F33D
scnpilot_expt_750_bf_scaffold_5116_7
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4100..4660)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C6EA2
DNA-binding cyclic-nucleotide binding protein {ECO:0000313|EMBL:CEN32716.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source
Crp/Fnr family transcriptional regulator
scnpilot_expt_750_bf_scaffold_5116_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5069..5596
DNA (528bp) protein (176aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriacea
sensor protein for response regulator AtoC (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MVV9_9SPHI
scnpilot_expt_750_bf_scaffold_5116_9
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5800..6093
DNA (294bp) protein (98aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MVV9_9SPHI
histidine kinase
scnpilot_expt_750_bf_scaffold_5116_10
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6202..7038
DNA (837bp) protein (279aa)
Helix-turn-helix domain-containing protein AraC type n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE55_NIAKG rbh
helix-turn-helix domain-containing protein
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:BAP32640.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source
scnpilot_expt_750_bf_scaffold_5116_11
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7115..7696
DNA (582bp) protein (194aa)
NAD(P)H dehydrogenase n=1 Tax=Flavobacterium sp. F52 RepID=J0RJG7_9FLAO
wrbA; NAD(P)H dehydrogenase
NAD(P)H dehydrogenase {ECO:0000313|EMBL:BAP32641.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp
scnpilot_expt_750_bf_scaffold_5116_12
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7791..9380)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J0RJH1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJF99051.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
Displaying 12 items

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