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scnpilot_expt_750_bf_scaffold_1498

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1498_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..319
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F2086
Thioredoxin oxidoreductase {ECO:0000313|EMBL:GAN45500.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiib
thioredoxin oxidoreductase
scnpilot_expt_750_bf_scaffold_1498_2
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

661..924
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B378EC
Uncharacterized protein {ECO:0000313|EMBL:KFN43878.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
scnpilot_expt_750_bf_scaffold_1498_3
unknown

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1490..1642
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1498_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1655..2155)
DNA (501bp) protein (167aa)
ogt; Methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ogt; methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374F037
scnpilot_expt_750_bf_scaffold_1498_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2204..2575)
DNA (372bp) protein (124aa)
DNA methylase n=1 Tax=Dyella japonica RepID=UPI00030F2692
DNA methylase
DNA methylase {ECO:0000313|EMBL:AHX13782.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_expt_750_bf_scaffold_1498_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2808..3596
DNA (789bp) protein (263aa)
Fibrillar collagen chain FAp1 alpha n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TA4_STIAD
Fibrillar collagen chain FAp1 alpha {ECO:0000313|EMBL:EAU63711.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;"
scnpilot_expt_750_bf_scaffold_1498_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3800..4576)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E7089
Tropinone reductase {ECO:0000313|EMBL:GAN45503.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter s
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_expt_750_bf_scaffold_1498_8
unknown

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4654..4908
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1498_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4930..6780)
DNA (1851bp) protein (617aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038294F9
signal peptide peptidase SppA, 67K type
scnpilot_expt_750_bf_scaffold_1498_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6881..8248)
DNA (1368bp) protein (456aa)
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR59_9GAMM
putative efflux protein, MATE family Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative efflux protein, MATE family
scnpilot_expt_750_bf_scaffold_1498_11
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8437..8703)
DNA (267bp) protein (89aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.14)
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:ABM31607.1}; EC=1.4.1.14 {ECO:0000313|EMBL:ABM31607.1};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Glutamate synthase (NADH) small subunit n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TKW9_ACIAC
scnpilot_expt_750_bf_scaffold_1498_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8732..12016)
DNA (3285bp) protein (1095aa)
Glutamate synthase (Ferredoxin) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZQ7_ACIDE
glutamate synthase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glutamate synthase
Displaying 12 items

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