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scnpilot_expt_750_bf_scaffold_1786

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1786_1
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..847
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRX7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KFN41750.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
DmsC family protein
scnpilot_expt_750_bf_scaffold_1786_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1002..1769
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003610546
Putative salt-induced outer membrane protein {ECO:0000313|EMBL:EIL97048.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
putative salt-induced outer membrane protein
scnpilot_expt_750_bf_scaffold_1786_3
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1904..2830)
DNA (927bp) protein (309aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003752DB7
porphobilinogen deaminase
scnpilot_expt_750_bf_scaffold_1786_4
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2827..3561)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372FB21 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37533.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
putative two-component system response regulator
scnpilot_expt_750_bf_scaffold_1786_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3558..4595)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365C61C
Histidine kinase {ECO:0000313|EMBL:GAN44951.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
histidine kinase
scnpilot_expt_750_bf_scaffold_1786_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4633..5307)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A84CA
putative esterase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative esterase
scnpilot_expt_750_bf_scaffold_1786_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5438..7822
DNA (2385bp) protein (795aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000375F13A rbh
Peptidase S9 {ECO:0000313|EMBL:GAN44953.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimini
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_expt_750_bf_scaffold_1786_8
unknown

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8386..8949
DNA (564bp) protein (188aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1786_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9305..9763
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EAA6D
membrane protease subunit, stomatin/prohibitin Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
membrane protease subunit, stomatin/prohibitin
scnpilot_expt_750_bf_scaffold_1786_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9834..10496
DNA (663bp) protein (221aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG2_9GAMM
16S rRNA methyltransferase
scnpilot_expt_750_bf_scaffold_1786_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10493..11284
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003790276 rbh
Chromosome partitioning protein {ECO:0000313|EMBL:KGI76699.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagr
chromosome partitioning protein
scnpilot_expt_750_bf_scaffold_1786_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11296..12171
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372ECF4
Chromosome partitioning protein ParB {ECO:0000313|EMBL:GAN45557.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="
ParB-like partition protein
scnpilot_expt_750_bf_scaffold_1786_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12264..12980
DNA (717bp) protein (239aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037FAFCD rbh
dolichol-phosphate mannosyltransferase
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:AJC46436.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xant
scnpilot_expt_750_bf_scaffold_1786_14

Not on your lists


13198..13434
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=2 Tax=mine drainage metagenome RepID=T1BC24_9ZZZZ
50S ribosomal protein L28 {ECO:0000313|EMBL:EQD67422.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L28
scnpilot_expt_750_bf_scaffold_1786_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13448..13612
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F7996
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
50S ribosomal protein L33
scnpilot_expt_750_bf_scaffold_1786_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13918..14853
DNA (936bp) protein (312aa)
Sulfate-transporting ATPase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E1H4_9GAMM
ABC transporter {ECO:0000313|EMBL:KGI79065.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC transporter related
scnpilot_expt_750_bf_scaffold_1786_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15238..15540
DNA (303bp) protein (101aa)
ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCN2_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL97223.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
ABC transporter permease
scnpilot_expt_750_bf_scaffold_1786_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15544..16212
DNA (669bp) protein (223aa)
ABC-type uncharacterized transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NSZ7_9GAMM
ABC-type uncharacterized transporter
ABC-type uncharacterized transporter {ECO:0000313|EMBL:AGG90616.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
Displaying 18 items

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