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scnpilot_expt_750_bf_scaffold_2224

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2224_1
unknown

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2224_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

290..712
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Rhodanobacter RepID=I4WH76_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2224_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(871..2346)
DNA (1476bp) protein (492aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZM5_9GAMM rbh
NAD/NADP transhydrogenase beta subunit
scnpilot_expt_750_bf_scaffold_2224_4
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2343..2645)
DNA (303bp) protein (101aa)
NAD(P) transhydrogenase n=1 Tax=Dyella japonica RepID=UPI0002D43A62
NAD(P) transhydrogenase
NAD(P) transhydrogenase {ECO:0000313|EMBL:AIF49148.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_expt_750_bf_scaffold_2224_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2733..3386
DNA (654bp) protein (218aa)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EIM02695.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EIM02695.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomo
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTA3_9GAMM rbh
RNA polymerase sigma factor, sigma-70 family
scnpilot_expt_750_bf_scaffold_2224_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3383..3796
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZM8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92669.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_expt_750_bf_scaffold_2224_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3800..4318
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBQ6_9GAMM
Protein of unknown function (DUF3106)
Uncharacterized protein {ECO:0000313|EMBL:AGG88090.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_2224_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4334..5434)
DNA (1101bp) protein (367aa)
NAD/NADP transhydrogenase alpha subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NBV6_9GAMM
NAD/NADP transhydrogenase alpha subunit
NAD/NADP transhydrogenase alpha subunit {ECO:0000313|EMBL:AGG88089.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
scnpilot_expt_750_bf_scaffold_2224_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5569..5979
DNA (411bp) protein (137aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:AGG88088.1}; EC=3.5.4.5 {ECO:0000313|EMBL:AGG88088.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
Cytidine deaminase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEV7_9GAMM
scnpilot_expt_750_bf_scaffold_2224_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6031..6600
DNA (570bp) protein (190aa)
Nitroreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKR0_9GAMM rbh
Nitroreductase {ECO:0000313|EMBL:EIM00052.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydan
nitroreductase
scnpilot_expt_750_bf_scaffold_2224_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6853..7485
DNA (633bp) protein (211aa)
5'-3' exonuclease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1M4_9GAMM
5'-3' exonuclease {ECO:0000313|EMBL:EIL93365.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115
exodeoxyribonuclease IX
scnpilot_expt_750_bf_scaffold_2224_12
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7512..8123
DNA (612bp) protein (204aa)
AraC family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4J7Z6_9BURK
AraC family transcriptional regulator {ECO:0000313|EMBL:EJO31544.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
AraC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2224_13
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8123..8299
DNA (177bp) protein (59aa)
Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISE6_BORPD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CAP43292.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_expt_750_bf_scaffold_2224_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8346..9458
DNA (1113bp) protein (371aa)
Membrane protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U170_ALCXX rbh
Membrane protein {ECO:0000313|EMBL:KGY25708.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xy
membrane protein
scnpilot_expt_750_bf_scaffold_2224_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10033..10593
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9FD95
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AHX15565.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensi
scnpilot_expt_750_bf_scaffold_2224_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10597..11682)
DNA (1086bp) protein (362aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
Homoserine dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT23_9GAMM
scnpilot_expt_750_bf_scaffold_2224_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11679..12869)
DNA (1191bp) protein (397aa)
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48)
O-succinylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:AGG87801.1}; EC=2.5.1.48 {ECO:0000313|EMBL:AGG87801.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa
O-succinylhomoserine (Thiol)-lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT24_9GAMM
scnpilot_expt_750_bf_scaffold_2224_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12922..13944)
DNA (1023bp) protein (341aa)
homoserine acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=666685 species="Bacteria; Proteobacteri
Homoserine O-acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT25_9GAMM rbh
scnpilot_expt_750_bf_scaffold_2224_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14278..14889
DNA (612bp) protein (204aa)
peroxidase (EC:1.11.1.7)
Peroxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXA4_9GAMM
Peroxidase {ECO:0000313|EMBL:EIL91845.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_expt_750_bf_scaffold_2224_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14886..15617
DNA (732bp) protein (244aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Rhodanobacter denitrificans RepID=I4WT26_9GAMM
cysteine synthase
Cysteine synthase {ECO:0000313|EMBL:AGG87799.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
Displaying 20 items

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