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scnpilot_expt_750_p_scaffold_2623_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2623_curated_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..2284
DNA (2283bp) protein (761aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUI5_9PORP
scnpilot_expt_750_p_scaffold_2623_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2347..2661
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZP0_9PORP
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
trxA_1; thioredoxin; K03671 thioredoxin 1
scnpilot_expt_750_p_scaffold_2623_curated_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2861..4843
DNA (1983bp) protein (661aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IWI0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02490.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
putative lipoprotein
scnpilot_expt_750_p_scaffold_2623_curated_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4900..5718
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW54_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06669.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2623_curated_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5742..6500)
DNA (759bp) protein (253aa)
UPF0246 protein HMPREF9455_03914 n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J3J7_9PORP
UPF0246 protein HMPREF9455_03914 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein; K09861 hypothetical protein
scnpilot_expt_750_p_scaffold_2623_curated_6
unknown

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6507..6899
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2623_curated_7
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7389..7847)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=3889280 bin=GWF2_Bacteroidetes_49_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_expt_750_p_scaffold_2623_curated_8
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8271..9593
DNA (1323bp) protein (441aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JBL0_9PORP
scnpilot_expt_750_p_scaffold_2623_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9618..10943
DNA (1326bp) protein (442aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
Diaminopimelate decarboxylase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZK4_9PORP
Displaying 9 items

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