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scnpilot_expt_750_p_scaffold_4501_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_4501_curated_1
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

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comp(1..423)
DNA (423bp) protein (141aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Prevotella sp. CAG:604 RepID=R6B1N7_9BACT
Tax=BJP_IG2102_Elusimicrobia_52_42
scnpilot_expt_750_p_scaffold_4501_curated_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(715..1602)
DNA (888bp) protein (296aa)
glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70]
Glutamyl-tRNA reductase n=1 Tax=Prevotella sp. CAG:604 RepID=R6BGA1_9BACT
Tax=CG_Paludi_01
scnpilot_expt_750_p_scaffold_4501_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1577..2077)
DNA (501bp) protein (167aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4]
Siroheme synthase N-terminal domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I9_PALPW
Tax=CG_Paludi_01
scnpilot_expt_750_p_scaffold_4501_curated_4
unknown

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comp(2081..2221)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_4501_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2285..2986)
DNA (702bp) protein (234aa)
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8]
Phosphoadenylylsulfate reductase (Thioredoxin) {ECO:0000313|EMBL:ADQ80680.1}; EC=1.8.4.8 {ECO:0000313|EMBL:ADQ80680.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Phosphoadenylylsulfate reductase (Thioredoxin) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I6_PALPW
scnpilot_expt_750_p_scaffold_4501_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3144..4433)
DNA (1290bp) protein (430aa)
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4); K00956 sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sulfate adenylyltransferase subunit 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I5_PALPW
scnpilot_expt_750_p_scaffold_4501_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4450..5352)
DNA (903bp) protein (301aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I4_PALPW
scnpilot_expt_750_p_scaffold_4501_curated_8
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5349..6359)
DNA (1011bp) protein (337aa)
delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24]
Porphobilinogen synthase n=1 Tax=Prevotella sp. CAG:604 RepID=R6BB77_9BACT
Porphobilinogen synthase {ECO:0000313|EMBL:CDA58109.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
scnpilot_expt_750_p_scaffold_4501_curated_9
unknown

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comp(6346..6492)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 9 items

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