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scnpilot_solids2_trim150_scaffold_2346

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2346_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..304
DNA (303bp) protein (101aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP25_9GAMM
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:EIM01217.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
CopG/DNA-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_2346_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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301..1326
DNA (1026bp) protein (342aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP26_9GAMM
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EIM01218.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
trbB; P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
scnpilot_solids2_trim150_scaffold_2346_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1323..1664
DNA (342bp) protein (114aa)
Conjugal transfer protein TrbC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP27_9GAMM
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EIM01219.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
trbC; putative conjugal transfer protein; K03197 type IV secretion system protein VirB2
scnpilot_solids2_trim150_scaffold_2346_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1661..1927
DNA (267bp) protein (89aa)
Conjugal transfer transmembrane protein TrbD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP28_9GAMM
Conjugal transfer transmembrane protein TrbD {ECO:0000313|EMBL:EIM01220.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
trbD; conjugal transfer transmembrane protein TrbD; K03198 type IV secretion system protein VirB3
scnpilot_solids2_trim150_scaffold_2346_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1938..4364
DNA (2427bp) protein (809aa)
Conjugal transfer ATPase TrbE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP29_9GAMM rbh
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:EIM01221.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
scnpilot_solids2_trim150_scaffold_2346_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4361..5089
DNA (729bp) protein (243aa)
Conjugal transfer protein TrbJ n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP30_9GAMM
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EIM01222.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
conjugal transfer protein TrbJ
scnpilot_solids2_trim150_scaffold_2346_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5095..5388
DNA (294bp) protein (98aa)
Lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP31_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIM01223.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
lipoprotein
scnpilot_solids2_trim150_scaffold_2346_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5385..6719
DNA (1335bp) protein (445aa)
Conjugal transfer protein TrbL n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP32_9GAMM
Conjugal transfer protein TrbL {ECO:0000313|EMBL:EIM01224.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
scnpilot_solids2_trim150_scaffold_2346_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6732..7439
DNA (708bp) protein (236aa)
Conjugal transfer protein TrbF n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP33_9GAMM
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EIM01225.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
trbF; Conjugative transfer protein TrbF
scnpilot_solids2_trim150_scaffold_2346_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7436..8443
DNA (1008bp) protein (336aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP34_9GAMM
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:EIM01226.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
P-type conjugative transfer protein TrbG
scnpilot_solids2_trim150_scaffold_2346_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8430..9719
DNA (1290bp) protein (430aa)
Conjugation TrbI family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP35_9GAMM
Conjugation TrbI family protein {ECO:0000313|EMBL:EIM01227.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
scnpilot_solids2_trim150_scaffold_2346_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9716..9973
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP36_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01228.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
Displaying 12 items

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