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scnpilot_solids2_trim150_scaffold_1434

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1434_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(79..1284)
DNA (1206bp) protein (402aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQZ4_9SPHI rbh
scnpilot_solids2_trim150_scaffold_1434_2
unknown

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1480..1698
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1434_3
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1703..1942
DNA (240bp) protein (80aa)
Plasmid stabilization system protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT86_9SPHI
Plasmid stabilization system protein {ECO:0000313|EMBL:KIA91781.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
scnpilot_solids2_trim150_scaffold_1434_4
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2358..3131)
DNA (774bp) protein (258aa)
Thioredoxin family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EK42_9SPHI
Thioredoxin family protein {ECO:0000313|EMBL:EDM34148.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
scnpilot_solids2_trim150_scaffold_1434_5
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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3290..3886
DNA (597bp) protein (199aa)
Putative uncharacterized protein id=4252715 bin=GWC2_Bacteroidetes_40_22 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids2_trim150_scaffold_1434_6
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4099..6354)
DNA (2256bp) protein (752aa)
Xylan esterase id=4252902 bin=GWC2_Bacteroidetes_40_22 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
xylan esterase
Tax=RBG_13_Bacteroidetes_42_15_curated
scnpilot_solids2_trim150_scaffold_1434_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6552..7151
DNA (600bp) protein (200aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDI6_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00436.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1434_8
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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7378..8586
DNA (1209bp) protein (403aa)
FecR protein id=4652657 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
anti-FecI sigma factor FecR rbh
Tax=GWF2_Bacteroidetes_40_14_curated
scnpilot_solids2_trim150_scaffold_1434_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8834..12205
DNA (3372bp) protein (1124aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4R1_SPHS2 rbh
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ81310.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_1434_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12233..13852
DNA (1620bp) protein (540aa)
RagB/SusD domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8W3_9SPHI rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EHQ28729.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids2_trim150_scaffold_1434_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13864..14991
DNA (1128bp) protein (376aa)
heparan-alpha-glucosaminide N-acetyltransferase (EC:2.3.1.78)
Uncharacterized protein id=4993668 bin=GWA2_Bacteroidetes_42_15 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_1434_12
CG_Arma_02, Armatimonadetes, Bacteria

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15380..15925
DNA (546bp) protein (182aa)
Tax=CG_Arma_02
Displaying 12 items

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