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scnpilot_solids2_trim150_scaffold_72

Search features with annotation key words

Displaying items 91-120 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_72_91
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103851..104903)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU75_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00480.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids2_trim150_scaffold_72_92
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104957..105964)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037BDA59 rbh
Membrane protein {ECO:0000313|EMBL:KGE09333.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
putative Ca2+/Na+ antiporter; K07301 inner membrane protein rbh
scnpilot_solids2_trim150_scaffold_72_93
unknown

Not on your lists

106391..106630
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_72_94
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106909..107865
DNA (957bp) protein (319aa)
Putative cation transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEE0_9GAMM
Putative cation transporter {ECO:0000313|EMBL:EIL97831.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation diffusion facilitator family transporter
scnpilot_solids2_trim150_scaffold_72_95
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108001..108360
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WM47_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00539.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_72_96
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108432..109730
DNA (1299bp) protein (433aa)
Outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDM3_9GAMM
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88865.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_97
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109727..110827
DNA (1101bp) protein (367aa)
Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT05_9GAMM
Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EIL90346.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_72_98
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110827..113967
DNA (3141bp) protein (1047aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL1_9GAMM
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIM01207.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids2_trim150_scaffold_72_99
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113964..114293
DNA (330bp) protein (110aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT7_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG88868.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_100
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114495..115046
DNA (552bp) protein (184aa)
Cation diffusion facilitator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT09_9GAMM
Cation diffusion facilitator {ECO:0000313|EMBL:EIL90350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
czcD1; Co/Zn/Cd efflux system component
scnpilot_solids2_trim150_scaffold_72_101
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115046..115951
DNA (906bp) protein (302aa)
Putative cation efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP21_9GAMM
Putative cation efflux protein {ECO:0000313|EMBL:EIM01213.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative cation efflux protein; K03295 cation efflux system protein, CDF family
scnpilot_solids2_trim150_scaffold_72_102
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116214..117062
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK84_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08281.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_72_103
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117260..117703)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWK4_9GAMM
Mercuric resistance operon regulatory protein {ECO:0000313|EMBL:EXI77100.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_104
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117793..120192
DNA (2400bp) protein (800aa)
pbrA; Pb(II) resistance ATPase PbrA; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
P-type ATPase involved in Pb(II) resistance PbrA n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q58AJ6_RALME rbh
P-type ATPase involved in Pb(II) resistance PbrA {ECO:0000313|EMBL:ABF12806.1}; Pb-efflux ATPase {ECO:0000313|EMBL:CAI11271.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_solids2_trim150_scaffold_72_105
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120296..120583
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACM7_COLFT
hypothetical protein; K09981 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK62901.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
scnpilot_solids2_trim150_scaffold_72_106
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120643..121107
DNA (465bp) protein (155aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
signal peptidase II (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=2 Tax=Comamonadaceae RepID=A1W5E3_ACISJ
scnpilot_solids2_trim150_scaffold_72_107
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

121125..122021
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000360D790 rbh
Diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:CBN54765.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_108
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122098..122388
DNA (291bp) protein (97aa)
Co/Zn/Cd efflux system component n=1 Tax=Rhodanobacter denitrificans RepID=M4NMD2_9GAMM
Co/Zn/Cd efflux system component
Co/Zn/Cd efflux system component {ECO:0000313|EMBL:AGG88871.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_109
unknown

Not on your lists

comp(122321..122509)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_72_110

Not on your lists

comp(122642..123430)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BLV5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD69463.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_111
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123573..124448)
DNA (876bp) protein (292aa)
Iron permease FTR1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Z9_9GAMM
Iron permease FTR1 {ECO:0000313|EMBL:EIL94190.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
high-affinity Fe2+/Pb2+ permease
scnpilot_solids2_trim150_scaffold_72_112
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124455..124928)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8B0E
Uncharacterized protein {ECO:0000313|EMBL:EIL96199.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_113
unknown

Not on your lists

125099..125251
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_72_114
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125323..126159)
DNA (837bp) protein (279aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
UDP kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DA321 rbh
scnpilot_solids2_trim150_scaffold_72_115
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126858..129206)
DNA (2349bp) protein (783aa)
Copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL8_9GAMM rbh
Copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting {ECO:0000313|EMBL:AGG88847.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting rbh
scnpilot_solids2_trim150_scaffold_72_116
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129252..129569)
DNA (318bp) protein (106aa)
PO3Cd1.13 n=1 Tax=uncultured Xanthomonadaceae bacterium RepID=J9V0I2_9GAMM
NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96319.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_117
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129806..130927)
DNA (1122bp) protein (374aa)
Cytochrome c family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY8_9GAMM
Cytochrome c family protein {ECO:0000313|EMBL:EIM01180.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ketosteroid isomerase-like enzyme
scnpilot_solids2_trim150_scaffold_72_118
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130942..132135)
DNA (1194bp) protein (398aa)
Copper resistance B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ2_9GAMM
Copper resistance B {ECO:0000313|EMBL:EIL90333.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
uncharacterized protein involved in copper resistance
scnpilot_solids2_trim150_scaffold_72_119
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132132..133937)
DNA (1806bp) protein (602aa)
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW6_9GAMM
Copper-resistance protein, CopA family protein {ECO:0000313|EMBL:EIL89957.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copper-resistance protein, CopA family
scnpilot_solids2_trim150_scaffold_72_120
unknown

Not on your lists

comp(134051..134284)
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying items 91-120 of 194 in total

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