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scnpilot_solids2_trim150_scaffold_72

Search features with annotation key words

Displaying items 31-60 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_72_31
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26044..26472
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIL9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87060.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_32
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26477..26695)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89324.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_33
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26789..27136
DNA (348bp) protein (116aa)
Glutathione-dependent formaldehyde-activating GFA n=2 Tax=Pseudogulbenkiania RepID=G2IYY3_PSEUL
glutathione-dependent formaldehyde-activating GFA
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EEG09221.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
scnpilot_solids2_trim150_scaffold_72_34
Pseudomonas mediterranea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27234..27797
DNA (564bp) protein (188aa)
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas syringae BRIP39023 RepID=L7H1T4_PSESX
Transcriptional regulator {ECO:0000313|EMBL:KGU83811.1}; TaxID=1348058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mediterranea CFBP 5447.;"
algR3; alginate regulatory protein AlgR3
scnpilot_solids2_trim150_scaffold_72_35
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

27919..28473
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Helobdella robusta RepID=T1F6Y0_HELRO
Uncharacterized protein {ECO:0000313|EMBL:ESO03824.1, ECO:0000313|EnsemblMetazoa:HelroP173526}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
scnpilot_solids2_trim150_scaffold_72_36
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

28631..30406
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000374242C rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV81375.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
scnpilot_solids2_trim150_scaffold_72_37
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30636..31916
DNA (1281bp) protein (427aa)
TIGR03440 family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS2_9GAMM
TIGR03440 family protein
TIGR03440 family protein {ECO:0000313|EMBL:AGG89785.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_38
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31913..32905
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DFC3B
Methyltransferase {ECO:0000313|EMBL:KGI77857.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_72_39
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33007..35772
DNA (2766bp) protein (922aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD71_9GAMM
Zinc carboxypeptidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_72_40
unknown

Not on your lists

35794..36081
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_72_41
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36312..36521
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003476466
Cold-shock protein {ECO:0000313|EMBL:KFL37581.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
putative cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
scnpilot_solids2_trim150_scaffold_72_42
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36636..36932
DNA (297bp) protein (99aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI000376314E
Membrane protein {ECO:0000313|EMBL:AHX12564.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_43
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36966..37742
DNA (777bp) protein (259aa)
ThiF domain-containing protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CD936
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_72_44
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37841..39373
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z3D1_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:CDF82398.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_45
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39411..39923
DNA (513bp) protein (171aa)
17 kDa surface antigen n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP0_9GAMM
17 kDa surface antigen {ECO:0000313|EMBL:EIL88481.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_72_46
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40104..40535)
DNA (432bp) protein (144aa)
Cell Wall Hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NPB3_9GAMM
Cell Wall Hydrolase
Cell Wall Hydrolase {ECO:0000313|EMBL:AGG89476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_47
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40885..41694)
DNA (810bp) protein (270aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPA3_9GAMM
Folate-binding protein YgfZ {ECO:0000313|EMBL:EIM01295.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
folate-binding protein YgfZ
scnpilot_solids2_trim150_scaffold_72_48
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42208..42630
DNA (423bp) protein (141aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:AGG87392.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AGG87392.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WX32_9GAMM
scnpilot_solids2_trim150_scaffold_72_49
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42627..43040
DNA (414bp) protein (138aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTQ8_PUSST
succinate dehydrogenase, hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative {ECO:0000313|EMBL:AEC21022.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_72_50
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43093..44889
DNA (1797bp) protein (599aa)
succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTQ9_PUSST rbh
scnpilot_solids2_trim150_scaffold_72_51
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45001..45702
DNA (702bp) protein (234aa)
succinate dehydrogenase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTR0_PUSST rbh
scnpilot_solids2_trim150_scaffold_72_52
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45733..45993
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W032_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92823.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_53
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45990..46454
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363E70E
Uncharacterized protein {ECO:0000313|EMBL:KGI78136.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_54
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46581..47822
DNA (1242bp) protein (414aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHB7_9GAMM
Cell division protein FtsX {ECO:0000313|EMBL:KGI78137.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
lipoprotein releasing system, transmembrane protein, LolC/E family
scnpilot_solids2_trim150_scaffold_72_55
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47815..48609
DNA (795bp) protein (265aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC transporter n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B8E4D
lipoprotein releasing system, ATP-binding protein
scnpilot_solids2_trim150_scaffold_72_56
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48785..50977
DNA (2193bp) protein (731aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPB3_9GAMM
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:EIM01305.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_72_57
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51078..51755
DNA (678bp) protein (226aa)
biopolymer transporter ExbB n=1 Tax=Dyella japonica RepID=UPI0002E5CE5A
Biopolymer transporter ExbB {ECO:0000313|EMBL:AHX12740.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
biopolymer transport protein
scnpilot_solids2_trim150_scaffold_72_58
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51768..52196
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A8607
Biopolymer transporter {ECO:0000313|EMBL:KGI78138.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
biopolymer transport protein; K03559 biopolymer transport protein ExbD
scnpilot_solids2_trim150_scaffold_72_59
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52193..53968
DNA (1776bp) protein (592aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Lipid A export permease/ATP-binding protein MsbA n=2 Tax=Rhodanobacter denitrificans RepID=M4NHA3_9GAMM
lipid A export permease/ATP-binding protein MsbA
scnpilot_solids2_trim150_scaffold_72_60
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53983..54969
DNA (987bp) protein (329aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NP94_9GAMM
tetraacyldisaccharide 4''-kinase
Displaying items 31-60 of 194 in total

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