ggKbase home page

scnpilot_solids2_trim150_scaffold_72_34

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 27234..27797

Top 3 Functional Annotations

Value Algorithm Source
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas syringae BRIP39023 RepID=L7H1T4_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 188.0
  • Bit_score: 79
  • Evalue 5.30e-12
Transcriptional regulator {ECO:0000313|EMBL:KGU83811.1}; TaxID=1348058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mediterranea CFBP 5447.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 173.0
  • Bit_score: 82
  • Evalue 6.70e-13
algR3; alginate regulatory protein AlgR3 similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 166.0
  • Bit_score: 78
  • Evalue 2.20e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mediterranea → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGTTACAAAACGGAACCACAAACCCGTGGGCAAGGCCGGCAAGAAAGTCCGCAAGGCGCCCGTCAAGTCCAAGGCCGGCAAGGCATCCGCGATTCGCAAGGCGGCCACGAAACCGGCCACGCGCGCGGCCGTGCGCAAGTCCCGCCCCGTCGCGAAGACGGCTTCCAGGTCCGTGGCCAAGCCTGCCACCGTGAAACAGGTCGCGGTCAAACCGGCTGCCGCAAAACCCGTGGCGCCTGCCAGATCGCCGCTTGCGCGGCCGGCATCGGTCAAGACCGCAGCCAAGGCGGTGGCGGCTGCGCGCGCCAATGCCAGACGGCGTGCGCCATCCTACATCCCCCGTTCCAGTTTCGGTGACGATTGGAAGATGGGCGGCCCGATCGAGTTGCCGCGCCAGCCGGCCCCGGCCGCGCATACGCCGACCCGCAAGCCGCCGAAACCGCGCGCGCCGAAGCCCAAGGCCATCAGCCATGAGCAGGCAGTCGCCAACTTGAAGGCGTTGCTGGAGTCGCGCAAGCGCAAGGATCGCGGTGGCGACGCGGGCGCGCCCAAGGGCGCCTGA
PROTEIN sequence
Length: 188
MVTKRNHKPVGKAGKKVRKAPVKSKAGKASAIRKAATKPATRAAVRKSRPVAKTASRSVAKPATVKQVAVKPAAAKPVAPARSPLARPASVKTAAKAVAAARANARRRAPSYIPRSSFGDDWKMGGPIELPRQPAPAAHTPTRKPPKPRAPKPKAISHEQAVANLKALLESRKRKDRGGDAGAPKGA*