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scnpilot_solids2_trim150_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_72_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..191
DNA (189bp) protein (63aa)
Membrane protein {ECO:0000313|EMBL:AHX12744.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids2_trim150_scaffold_72_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

830..1612
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91503.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pyrroloquinoline quinone (coenzyme PQQ) biosynthesis protein C
scnpilot_solids2_trim150_scaffold_72_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1740..4433
DNA (2694bp) protein (898aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME6_9GAMM
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIL88387.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids2_trim150_scaffold_72_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4593..5195
DNA (603bp) protein (201aa)
Cation transport regulator protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CPM5_9BURK
Gamma-glutamyl cyclotransferase {ECO:0000313|EMBL:KGI77498.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
chaC; cation transport regulator protein
scnpilot_solids2_trim150_scaffold_72_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5212..6708)
DNA (1497bp) protein (499aa)
Glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD93_9GAMM
Amino acid ABC transporter permease {ECO:0000313|EMBL:KGI77629.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
scnpilot_solids2_trim150_scaffold_72_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6705..7484)
DNA (780bp) protein (260aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK3_9GAMM
ABC-type proline/glycine betaine transport system, ATPase component
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:AGG89562.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7447..8232)
DNA (786bp) protein (262aa)
Methyltransferase domain family n=2 Tax=Nitrosococcus oceani RepID=B6C2S5_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
scnpilot_solids2_trim150_scaffold_72_8
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8434..8793)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CFFA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC45453.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
scnpilot_solids2_trim150_scaffold_72_9
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8790..9329)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GA19_XANCT
Uncharacterized protein {ECO:0000313|EMBL:KGM57837.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9620..10246
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDR8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88915.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10358..10720
DNA (363bp) protein (121aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4C5_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL94316.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_12
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10742..11395
DNA (654bp) protein (218aa)
Glutathione S-transferase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S4P7_9RALS rbh
Glutathione S-transferase {ECO:0000313|EMBL:KJK04927.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
glutathione S-transferase
scnpilot_solids2_trim150_scaffold_72_13
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11550..11996)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D154F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH62931.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
scnpilot_solids2_trim150_scaffold_72_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12038..12448)
DNA (411bp) protein (137aa)
glyoxalase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003758621
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL94631.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glyoxalase family protein
scnpilot_solids2_trim150_scaffold_72_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12482..12937)
DNA (456bp) protein (152aa)
AraC family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000370A8A7
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL94632.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_72_16
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12991..13644)
DNA (654bp) protein (218aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Rhizobium sp. CF080 RepID=J3BXR7_9RHIZ rbh
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EUB95360.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
scnpilot_solids2_trim150_scaffold_72_17
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13808..15016
DNA (1209bp) protein (403aa)
diguanylate cyclase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B54057
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:KGQ18119.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
PleD-like protein
scnpilot_solids2_trim150_scaffold_72_18
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15068..15334
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X597_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI26227.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
scnpilot_solids2_trim150_scaffold_72_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15342..15677)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035F8C04
ArsR family transcriptional regulator {ECO:0000313|EMBL:EIL94605.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_72_20
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15686..16177)
DNA (492bp) protein (164aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LPW6_BURGS
Vanillate O-demethylase oxidoreductase VanB {ECO:0000313|EMBL:KGE07415.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
activator of Hsp90 ATPase 1 family protein
scnpilot_solids2_trim150_scaffold_72_21
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16321..17637
DNA (1317bp) protein (439aa)
Amidohydrolase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y494_9PROT rbh
Putative hydrolase {ECO:0000313|EMBL:GAO39375.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative hydrolase rbh
scnpilot_solids2_trim150_scaffold_72_22
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17735..18694
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003492E92 rbh
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABZ73530.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids2_trim150_scaffold_72_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18789..19550
DNA (762bp) protein (254aa)
sugar ABC transporter permease n=1 Tax=Dyella ginsengisoli RepID=UPI0003451893 rbh
hypothetical protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_24
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19763..20821
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D1229
Histidine kinase {ECO:0000313|EMBL:EYR67427.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
adrA; diguanylate cyclase/phosphodiesterase domain-containing protein
scnpilot_solids2_trim150_scaffold_72_25
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20911..21315
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAB0_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_72_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21385..22176
DNA (792bp) protein (264aa)
Putative methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD67_9GAMM
Putative methyltransferase {ECO:0000313|EMBL:EIL97408.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_72_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22243..22902)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97014.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_72_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23241..24116)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0I0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92971.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_72_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24288..24899
DNA (612bp) protein (204aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY55_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_72_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24980..26014
DNA (1035bp) protein (345aa)
lipA; lipoic acid synthetase; K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Lipoyl synthase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJP4_9GAMM
Displaying items 1-30 of 194 in total

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