ggKbase home page

scnpilot_solids2_trim150_scaffold_96

Search features with annotation key words

Displaying items 121-150 of 244 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_96_117
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143520..144818)
DNA (1299bp) protein (433aa)
MFS transporter, partial n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5DB4E
major facilitator superfamily transporter
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_96_118
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144961..145590)
DNA (630bp) protein (210aa)
Cytochrome c family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA7_9GAMM
Cytochrome c family protein {ECO:0000313|EMBL:EIM00599.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ketosteroid isomerase-like enzyme
scnpilot_solids2_trim150_scaffold_96_119
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145701..146729)
DNA (1029bp) protein (343aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIA5_9GAMM
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG89403.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_120
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146935..148140
DNA (1206bp) protein (402aa)
Putative reductase UUA_05142 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative reductase UUA_05142 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP46_9GAMM rbh
putative paraquat-inducible protein B rbh
scnpilot_solids2_trim150_scaffold_96_121
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148228..148518
DNA (291bp) protein (97aa)
Transcriptional regulator protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFJ1_9GAMM
Transcriptional regulator protein {ECO:0000313|EMBL:EIL98232.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_96_122
Pseudomonas sp. GM18, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148601..149218
DNA (618bp) protein (206aa)
cell division protein Fic n=1 Tax=Nevskia ramosa RepID=UPI0003B6083D
Protein involved in cell division {ECO:0000313|EMBL:EJM22011.1}; TaxID=1144324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM18.;"
fic_[C]; Fic family putative cell filamentation protein
scnpilot_solids2_trim150_scaffold_96_123
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149233..149427)
DNA (195bp) protein (65aa)
NODE_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97323.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
scnpilot_solids2_trim150_scaffold_96_124
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149553..150278
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2Y4_HERA2
Uncharacterized protein {ECO:0000313|EMBL:KGQ18105.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_125
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150619..151539
DNA (921bp) protein (307aa)
twin-arginine translocation pathway signal protein (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F843D rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_96_126
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151629..152414)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0U5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93086.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_96_127
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152466..153878)
DNA (1413bp) protein (471aa)
Short chain fatty acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU5_9GAMM
short chain fatty acids transporter
Short chain fatty acids transporter {ECO:0000313|EMBL:AGG90385.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_128
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153960..154877)
DNA (918bp) protein (306aa)
Putative DMT superfamily transporter inner membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W279_9GAMM
DMT(drug/metabolite transporter) superfamily permease
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_96_129
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154971..155240)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W860_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95651.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_130
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155320..155670
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS43_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90034.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
scnpilot_solids2_trim150_scaffold_96_131
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155750..157549)
DNA (1800bp) protein (600aa)
TrkA-C domain-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS42_9GAMM
TrkA-C domain-containing protein {ECO:0000313|EMBL:EIL90033.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
di-/tricarboxylate transporter
scnpilot_solids2_trim150_scaffold_96_132
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157802..158626
DNA (825bp) protein (275aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Methylenetetrahydrofolate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVS5_9GAMM
scnpilot_solids2_trim150_scaffold_96_133
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158711..159496
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHD6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90370.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_134
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159938..160153)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WM46_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00538.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_135
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160224..160646)
DNA (423bp) protein (141aa)
Putative mercury transport protein MerC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ7_9GAMM
Putative mercury transport protein MerC {ECO:0000313|EMBL:EIM01189.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
merC; putative mercury transport protein MerC
scnpilot_solids2_trim150_scaffold_96_136
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160716..161123
DNA (408bp) protein (136aa)
Hg(Ii)-responsive transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ6_9GAMM
Hg(Ii)-responsive transcriptional regulator {ECO:0000313|EMBL:EIM01188.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Hg(II)-responsive transcriptional regulator
scnpilot_solids2_trim150_scaffold_96_137
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161256..161612)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFM2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_138
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161648..164803)
DNA (3156bp) protein (1052aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT00_9GAMM
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIL90341.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids2_trim150_scaffold_96_139
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164800..166122)
DNA (1323bp) protein (441aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ9_9GAMM
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family {ECO:0000313|EMBL:EIL90340.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_96_140
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166119..167393)
DNA (1275bp) protein (425aa)
Putative outer membrane efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ1_9GAMM
Putative outer membrane efflux protein {ECO:0000313|EMBL:EIM01183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane protein
scnpilot_solids2_trim150_scaffold_96_141
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168124..168576)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00600.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative metal-binding protein
scnpilot_solids2_trim150_scaffold_96_142
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168573..169676)
DNA (1104bp) protein (368aa)
Ketosteroid isomerase-like enzyme n=1 Tax=Rhodanobacter denitrificans RepID=M4NDN2_9GAMM
ketosteroid isomerase-like enzyme
Ketosteroid isomerase-like enzyme {ECO:0000313|EMBL:AGG88844.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_143
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169688..170674)
DNA (987bp) protein (329aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR0_9GAMM
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_144
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170671..172455)
DNA (1785bp) protein (595aa)
Copper resistance transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY6_9GAMM
Copper resistance transmembrane protein {ECO:0000313|EMBL:EIM01178.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
copper-resistance protein, CopA family
scnpilot_solids2_trim150_scaffold_96_145
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173213..175822
DNA (2610bp) protein (870aa)
hypothetical protein; K14205 phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89051.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_96_146
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175840..176718
DNA (879bp) protein (293aa)
Virulence protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB1_9GAMM
Virulence protein {ECO:0000313|EMBL:EIL89052.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
virulence protein
Displaying items 121-150 of 244 in total

View Taxonomy