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scnpilot_solids2_trim150_scaffold_138

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Displaying items 31-60 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_138_31
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30717..31742)
DNA (1026bp) protein (342aa)
2-hydroxyacid dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI000375A03A rbh
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:CDM63190.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_138_32
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31818..33200)
DNA (1383bp) protein (461aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00235488}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00235488};; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D841_9RHIZ rbh
L-fucose isomerase-like, C-terminal domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_138_33
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33197..34114)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037A050F
Uncharacterized protein {ECO:0000313|EMBL:ESX99423.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein; K03478 hypothetical protein
scnpilot_solids2_trim150_scaffold_138_34
unknown

Not on your lists

comp(34111..34491)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036995A4
scnpilot_solids2_trim150_scaffold_138_35
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34497..35312)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F9685 rbh
Lactose ABC transporter permease {ECO:0000313|EMBL:AIF44422.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_138_36
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35314..36291)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C2DEB rbh
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:AGE22475.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
scnpilot_solids2_trim150_scaffold_138_37
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36304..37554)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362E427 rbh
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EHQ62935.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_138_38
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(37618..38664)
DNA (1047bp) protein (349aa)
oxidoreductase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18] rbh
Oxidoreductase domain protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJY8_PLABD rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ADY58677.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
scnpilot_solids2_trim150_scaffold_138_39
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38763..39842)
DNA (1080bp) protein (360aa)
Transcriptional regulator LacI family id=3932092 bin=GWC2_Methylomirabilis_70_16 species=Grimontia hollisae genus=Grimontia taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_solids2_trim150_scaffold_138_40
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39949..41043
DNA (1095bp) protein (365aa)
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FC25_9RHIZ rbh
ABC transporter related protein {ECO:0000313|EMBL:EHS49628.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_138_41
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

41050..41901
DNA (852bp) protein (284aa)
Glucosamine-6-phosphate isomerase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C381_9PLAN
6-phosphogluconolactonase/Glucosamine-6-phosphateisomerase/deaminase
Tax=CG_Arma_02
scnpilot_solids2_trim150_scaffold_138_42
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41934..43061)
DNA (1128bp) protein (376aa)
mandelate racemase/muconate lactonizing enzyme (EC:5.1.-.-) rbh
Putative mandelate racemase/muconate lactonizing enzyme n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1F5_9PROT rbh
Putative mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:EDP61884.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
scnpilot_solids2_trim150_scaffold_138_43
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43101..44000)
DNA (900bp) protein (300aa)
Transcriptional regulator, IclR family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYY9_9PROT
Gluconolactonase {ECO:0000313|EMBL:EWY39723.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
senescence marker protein-30
scnpilot_solids2_trim150_scaffold_138_44
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44002..44766)
DNA (765bp) protein (255aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Nitratireductor indicus C115 RepID=K2PND7_9RHIZ rbh
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EKF42577.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hpcH; HpcH/HpaI aldolase
scnpilot_solids2_trim150_scaffold_138_45
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44813..45538)
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=6 Tax=Rhizobium meliloti RepID=F6BQ83_SINMB
putative transcription regulator protein
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEG05277.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
scnpilot_solids2_trim150_scaffold_138_46
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45699..46973
DNA (1275bp) protein (425aa)
Extracellular solute-binding protein family 1 n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FVE4_DESHD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS48999.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_138_47
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46973..47908
DNA (936bp) protein (312aa)
ABC transporter permease n=1 Tax=Desulfitobacterium hafniense RepID=UPI00035C206E
hypothetical protein; K02025 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX01561.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
scnpilot_solids2_trim150_scaffold_138_48
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47905..48792
DNA (888bp) protein (296aa)
ABC transporter permease n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003627B66
ABC transporter permease {ECO:0000313|EMBL:KJS49004.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein; K02026 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_138_49
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48785..49621
DNA (837bp) protein (279aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KID31484.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_138_50
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49621..50712
DNA (1092bp) protein (364aa)
ABC transporter, ATP-binding protein n=2 Tax=Coprococcus RepID=C0BEN9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG88316.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ABC transporter; K10112 maltose/maltodextrin transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_138_51
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50731..51897
DNA (1167bp) protein (389aa)
L-alanine-DL-glutamate epimerase-like protein {ECO:0000313|EMBL:KID31482.1}; EC=4.2.1.6 {ECO:0000313|EMBL:KID31482.1};; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00035FFB9E rbh
L-alanine-DL-glutamate epimerase-like protein
scnpilot_solids2_trim150_scaffold_138_52
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51987..53060)
DNA (1074bp) protein (358aa)
Malate dehydrogenase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D833_9RHIZ rbh
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:EDQ33211.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
malate/L-lactate dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_138_53
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53057..53998)
DNA (942bp) protein (314aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
Phosphoglycerate dehydrogenase n=1 Tax=Ahrensia sp. R2A130 RepID=E0MJV2_9RHOB rbh
3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KGF66715.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
scnpilot_solids2_trim150_scaffold_138_54
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54071..55252)
DNA (1182bp) protein (394aa)
garD; D-galactarate dehydratase GarD (EC:4.2.1.42); K01685 altronate hydrolase [EC:4.2.1.7] rbh
D-galactarate dehydratase GarD n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M901_9RHIZ rbh
D-galactarate dehydratase GarD {ECO:0000313|EMBL:EKF18596.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
scnpilot_solids2_trim150_scaffold_138_55
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55301..55588)
DNA (288bp) protein (96aa)
SAF domain-containing protein; K01685 altronate hydrolase [EC:4.2.1.7]
Altronate hydrolase n=2 Tax=Oligotropha carboxidovorans RepID=B6JJR5_OLICO
SAF domain protein {ECO:0000313|EMBL:AEI05307.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_138_56
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55702..56436
DNA (735bp) protein (245aa)
Transcriptional regulator, GntR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D839_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EDQ33215.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_138_57
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56525..58003)
DNA (1479bp) protein (493aa)
GntR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E7691 rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AHK46239.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase rbh
scnpilot_solids2_trim150_scaffold_138_58
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58163..59197
DNA (1035bp) protein (345aa)
Taurine ABC transporter, periplasmic binding protein n=2 Tax=Ochrobactrum RepID=C4WPK8_9RHIZ rbh
taurine ABC transporter, periplasmic binding protein; K15551 taurine transport system substrate-binding protein rbh
Taurine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERI15596.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
scnpilot_solids2_trim150_scaffold_138_59
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59293..60114
DNA (822bp) protein (274aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ABC transporter; K10831 taurine transport system ATP-binding protein [EC:3.6.3.36] rbh
Nitrate ABC transporter ATP-binding protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YU49_9RHIZ rbh
scnpilot_solids2_trim150_scaffold_138_60
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60107..60946
DNA (840bp) protein (280aa)
Taurine transport system permease protein TauC n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HUU7_ACHXA rbh
Taurine ABC transporter permease {ECO:0000313|EMBL:KGY25247.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
taurine transporter permease TauC; K15552 taurine transport system permease protein rbh
Displaying items 31-60 of 154 in total

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