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scnpilot_solids2_trim150_scaffold_138

Search features with annotation key words

Displaying items 61-90 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_138_61
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61078..61470
DNA (393bp) protein (131aa)
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003717051
tauX; taurine dehydrogenase small subunit TauX
Putative taurine dehydrogenase small subunit TauX {ECO:0000313|EMBL:AEI92810.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
scnpilot_solids2_trim150_scaffold_138_62
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61542..62936
DNA (1395bp) protein (465aa)
FAD dependent oxidoreductase n=2 Tax=Rhizobium meliloti RepID=F6E878_SINMK rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KDP75647.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
FAD dependent oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_138_63
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62984..64762
DNA (1779bp) protein (593aa)
Sulfoacetaldehyde acetyltransferase {ECO:0000313|EMBL:EFO30205.1}; EC=2.3.3.15 {ECO:0000313|EMBL:EFO30205.1};; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
xsc; sulfoacetaldehyde acetyltransferase Xsc (EC:2.3.3.15) rbh
Sulfoacetaldehyde acetyltransferase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CL06_9RHOB rbh
scnpilot_solids2_trim150_scaffold_138_64
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64777..65799
DNA (1023bp) protein (341aa)
phosphate acetyltransferase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] rbh
phosphotransacetylase n=1 Tax=Rhizobium meliloti RepID=UPI0003622088 rbh
Phosphate acetyltransferase {ECO:0000313|EMBL:EZQ14547.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_138_65
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65935..67002
DNA (1068bp) protein (356aa)
Putative membrane protein YeiH n=1 Tax=Rhodovulum sp. PH10 RepID=J5PL71_9RHOB rbh
Putative membrane protein YeiH {ECO:0000313|EMBL:EJW11472.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_138_66
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67064..67954
DNA (891bp) protein (297aa)
LysR family transcriptional regulator YeiE n=1 Tax=Rhodovulum sp. PH10 RepID=J6LE97_9RHOB rbh
LysR family transcriptional regulator YeiE {ECO:0000313|EMBL:EJW11473.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
LysR family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_138_67
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68050..68394)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D55C6
Ferredoxin {ECO:0000313|EMBL:KGM31877.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative ferredoxin; K05524 ferredoxin
scnpilot_solids2_trim150_scaffold_138_68
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68405..69181)
DNA (777bp) protein (259aa)
enoyl-CoA hydratase/isomerase; K08299 carnitinyl-CoA dehydratase [EC:4.2.1.-] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E6DC4E rbh
Crotonase {ECO:0000313|EMBL:KGM31876.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
scnpilot_solids2_trim150_scaffold_138_69
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69178..70383)
DNA (1206bp) protein (402aa)
putative acyl-CoA transferase; K07749 formyl-CoA transferase [EC:2.8.3.16] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DAA0BC rbh
CoA-transferase {ECO:0000313|EMBL:KGM31875.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
scnpilot_solids2_trim150_scaffold_138_70
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70470..71825)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031A2EF3 rbh
Invasion protein {ECO:0000313|EMBL:KGM31874.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
FAD-dependent oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_138_71
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71860..72708)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EB8576 rbh
ABC transporter permease {ECO:0000313|EMBL:KGM31873.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter, permease protein rbh
scnpilot_solids2_trim150_scaffold_138_72
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72708..73517)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E93E8C rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KAK48801.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
ABC transporter, ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_138_73
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73531..74565)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000304F46F rbh
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM30707.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative ABC transporter, substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_138_74
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74787..75707
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036845C5 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK54024.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_138_75
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75924..77471
DNA (1548bp) protein (516aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Thiamine pyrophosphate enzyme domain protein TPP-binding protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAW3_PARDP rbh
Decarboxylase {ECO:0000313|EMBL:KEJ97012.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
scnpilot_solids2_trim150_scaffold_138_76
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77488..79797
DNA (2310bp) protein (770aa)
Biotin sulfoxide reductase (BDS reductase) (BSO reductase) {ECO:0000313|EMBL:CCE10594.1}; EC=1.-.-.- {ECO:0000313|EMBL:CCE10594.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
bisC; biotin sulfoxide reductase (EC:1.-.-.-); K08351 biotin sulfoxide reductase [EC:1.-.-.-] rbh
Biotin sulfoxide reductase (BDS reductase) (BSO reductase) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVV6_9BRAD rbh
scnpilot_solids2_trim150_scaffold_138_77
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79954..81090)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWG8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHM02616.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_138_78
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81114..82670)
DNA (1557bp) protein (519aa)
acetyl-CoA synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
AMP-binding enzyme n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWG7_9PROT rbh
AMP-binding enzyme {ECO:0000313|EMBL:EHM02615.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
scnpilot_solids2_trim150_scaffold_138_79
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82765..83652
DNA (888bp) protein (296aa)
IclR helix-turn-helix protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWG6_9PROT
IclR helix-turn-helix protein {ECO:0000313|EMBL:EHM02614.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
IclR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_138_80
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

83702..84880
DNA (1179bp) protein (393aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=2475303 bin=GWC2_Methylomirabilis_70_16 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
scnpilot_solids2_trim150_scaffold_138_81
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

84903..85784
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000375163B
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
scnpilot_solids2_trim150_scaffold_138_82
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85781..86755
DNA (975bp) protein (325aa)
Putative branched-chain amino acid ABC transporter permease protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HEW0_ACTM4
putative branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=RBG_16_Gamma2_65_34_curated
scnpilot_solids2_trim150_scaffold_138_83
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

86752..87471
DNA (720bp) protein (240aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEB12785.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEB12785.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
ABC transporter n=1 Tax=Thermus islandicus RepID=UPI0003B5E2AD
scnpilot_solids2_trim150_scaffold_138_84
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

87472..88167
DNA (696bp) protein (232aa)
ABC transporter related protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NN45_MARHT
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:AEB12784.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
scnpilot_solids2_trim150_scaffold_138_85
unknown

Not on your lists

88180..88359
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_138_86
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88359..89573
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNR2_PUSST rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
scnpilot_solids2_trim150_scaffold_138_87
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89570..90772
DNA (1203bp) protein (401aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW23_ALIDB rbh
l-carnitine dehydratase/bile acid-inducible protein f rbh
L-carnitine dehydratase {ECO:0000313|EMBL:GAO24190.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids2_trim150_scaffold_138_88
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90925..91377)
DNA (453bp) protein (151aa)
Pseudoazurin n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MPN7_9RHIZ
Pseudoazurin {ECO:0000313|EMBL:KFG69056.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
pseudoazurin
scnpilot_solids2_trim150_scaffold_138_89
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91424..91873)
DNA (450bp) protein (150aa)
cytochrome C biogenesis protein CcdA n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037440A5
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
cycJ; cytochrome c-type biogenesis protein CycJ; K02197 cytochrome c-type biogenesis protein CcmE
scnpilot_solids2_trim150_scaffold_138_90
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91874..93157)
DNA (1284bp) protein (428aa)
hemA-2; 5-aminolevulinate synthase (EC:2.3.1.37); K00643 5-aminolevulinate synthase [EC:2.3.1.37] rbh
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
5-aminolevulinate synthase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL35_RUEPO rbh
Displaying items 61-90 of 154 in total

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