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scnpilot_solids2_trim150_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_138_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1089
DNA (1089bp) protein (363aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Acetyl-coenzyme A synthetase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLK8_9RHIZ
acetate--CoA ligase
scnpilot_solids2_trim150_scaffold_138_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1242..2228
DNA (987bp) protein (329aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF142 RepID=J2AVW7_9RHIZ rbh
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJJ27580.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
phosphoglycerate dehydrogenase-like oxidoreductase
scnpilot_solids2_trim150_scaffold_138_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2225..3853
DNA (1629bp) protein (543aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EYR78297.1}; EC=1.1.99.- {ECO:0000313|EMBL:EYR78297.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
alkJ; alcohol dehydrogenase (EC:1.1.99.-) rbh
Alcohol dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ18_9RHIZ rbh
scnpilot_solids2_trim150_scaffold_138_4
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3909..5165)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=2 Tax=Cronobacter sakazakii RepID=M1JCE2_CROSK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGL71001.1}; TaxID=930780 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii E899.;"
scnpilot_solids2_trim150_scaffold_138_5
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5232..6329)
DNA (1098bp) protein (366aa)
Putative amino acid ABC transporter, substrate-binding protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0DXQ4_9RHOB rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJZ22685.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;"
putative sugar ABC transporter, substrate-binding protein; K10439 ribose transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_138_6
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6367..7443)
DNA (1077bp) protein (359aa)
Inner-membrane translocator n=1 Tax=Ruegeria mobilis F1926 RepID=R0DX80_9RHOB rbh
Inner-membrane translocator {ECO:0000313|EMBL:ENZ93021.1}; TaxID=1265309 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis F1926.;"
putative amino acid ABC transporter, permease protein rbh
scnpilot_solids2_trim150_scaffold_138_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7447..9021)
DNA (1575bp) protein (525aa)
Putative amino acid ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXI3_RHITR rbh
putative amino acid ABC transporter, ATP-binding protein rbh
Putative amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74869.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
scnpilot_solids2_trim150_scaffold_138_8
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9195..10022
DNA (828bp) protein (276aa)
AraC family transcriptional regulator n=1 Tax=Ruegeria mobilis F1926 RepID=R0F6B9_9RHOB
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ93023.1}; TaxID=1265309 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis F1926.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_138_9
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10053..11180)
DNA (1128bp) protein (376aa)
alcohol dehydrogenase (EC:1.1.1.-); K00100 [EC:1.1.1.-] rbh
Putative Alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRN7_9BRAD rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KGF69500.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
scnpilot_solids2_trim150_scaffold_138_10
unknown

Not on your lists

comp(11412..11507)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_138_11
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11535..12386
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q8C7_RHOPT
Metal-binding domain containing of MaoC dehydratase {ECO:0000313|EMBL:KGJ02822.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein; K09709 mesaconyl-C4 CoA hydratase
scnpilot_solids2_trim150_scaffold_138_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12478..13068)
DNA (591bp) protein (197aa)
BioY protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1Y9_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGM32904.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
BioY protein; K03523 putative biotin biosynthesis protein BioY
scnpilot_solids2_trim150_scaffold_138_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13190..13831
DNA (642bp) protein (214aa)
Transcriptional regulatory protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4P3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KGM32903.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_138_14

Not on your lists

comp(14064..14669)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0Z2Z5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD42321.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_138_15
unknown

Not on your lists

14968..15192
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_138_16
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15272..15940
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHV1_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:AHN25381.1}; TaxID=1196095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_138_17
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16104..16703
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036E3233
Uncharacterized protein {ECO:0000313|EMBL:CDX11248.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transglutaminase
scnpilot_solids2_trim150_scaffold_138_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16801..17142
DNA (342bp) protein (114aa)
VanZ family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AW46_RHILS
Uncharacterized protein {ECO:0000313|EMBL:CDP50909.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
VanZ family protein
scnpilot_solids2_trim150_scaffold_138_19
unknown

Not on your lists

comp(17154..17252)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_138_20
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17256..20048)
DNA (2793bp) protein (931aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
NAD-dependent formate dehydrogenase catalytic subunit / NAD-dependent formate dehydrogenase iron-sulfur protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FL4_MESSB rbh
NAD-dependent formate dehydrogenase catalytic subunit / NAD-dependent formate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:ABG63811.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_138_21
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20050..21723)
DNA (1674bp) protein (558aa)
respiratory-chain NADH dehydrogenase domain-containing protein; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
NAD-dependent formate dehydrogenase flavoprotein subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FL3_MESSB rbh
NAD-dependent formate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:ABG63812.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_138_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21874..22104)
DNA (231bp) protein (77aa)
SirA-like protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
SirA-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FL2_MESSB
SirA-like protein {ECO:0000313|EMBL:ABG63813.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_138_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22190..23446)
DNA (1257bp) protein (419aa)
molybdopterin molybdochelatase; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] rbh
molybdopterin biosynthesis protein MoeA n=1 Tax=Afipia birgiae RepID=UPI0002DFC5C5 rbh
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:EHK56536.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_138_24

Not on your lists

23598..24491
DNA (894bp) protein (298aa)
formate dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC1A3C rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN92948.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein rbh
scnpilot_solids2_trim150_scaffold_138_25
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24460..25110
DNA (651bp) protein (217aa)
mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] rbh
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E6267 rbh
scnpilot_solids2_trim150_scaffold_138_26
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25211..27178)
DNA (1968bp) protein (656aa)
molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]; K07219 putative molybdopterin biosynthesis protein
molybdopterin biosynthesis protein MoeA n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037770D0
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:KJC49703.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
scnpilot_solids2_trim150_scaffold_138_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27191..28315)
DNA (1125bp) protein (375aa)
Molybdopterin binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRV2_9RHIZ rbh
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:EHK56540.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
molybdopterin binding domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_138_28
unknown

Not on your lists

comp(28287..28412)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_138_29
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28629..29555
DNA (927bp) protein (309aa)
Hypothetical sugar kinase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GAE8_9BRAD rbh
hypothetical sugar kinase rbh
Hypothetical sugar kinase {ECO:0000313|EMBL:BAL77735.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
scnpilot_solids2_trim150_scaffold_138_30
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29552..30598
DNA (1047bp) protein (349aa)
putative tagatose-1,6-diphosphate aldolase; K01635 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] rbh
Tagatose 1,6-diphosphate aldolase n=1 Tax=Nitratireductor indicus C115 RepID=K2PK38_9RHIZ rbh
Tagatose 1,6-diphosphate aldolase {ECO:0000313|EMBL:EKF41507.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Displaying items 1-30 of 154 in total

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