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scnpilot_solids2_trim150_scaffold_174

Search features with annotation key words

Displaying items 31-60 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_174_31
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38219..38800
-----------------
DNA (582bp)
protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMR2_NIAKG
RNA polymerase {ECO:0000313|EMBL:KIC92357.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_174_32
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38863..40374
-----------------
DNA (1512bp)
protein (504aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362427F
Uncharacterized protein {ECO:0000313|EMBL:KIC92356.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_174_33
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40440..41081
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMR0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03081.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_34
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41099..42937
-----------------
DNA (1839bp)
protein (613aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369CDCA
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
scnpilot_solids2_trim150_scaffold_174_35
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42980..43642)
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380FE03
Uncharacterized protein {ECO:0000313|EMBL:KIC91556.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_174_36
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43914..44546)
-----------------
DNA (633bp)
protein (211aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
carbonate dehydratase; K01673 carbonic anhydrase [EC:4.2.1.1]
carbonic anhydrase n=1 Tax=Segetibacter koreensis RepID=UPI0003786DFB
scnpilot_solids2_trim150_scaffold_174_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44599..45348)
-----------------
DNA (750bp)
protein (250aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK27_CHIPD rbh
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACU58368.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_174_38
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45515..45967
-----------------
DNA (453bp)
protein (151aa)
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMH3_CHIPD
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:ACU58517.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_174_39
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46024..47601
-----------------
DNA (1578bp)
protein (526aa)
Peptidase M28 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH05_NIAKG
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AEW00616.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_40
unknown

Not on your lists

47735..48466
-----------------
DNA (732bp)
protein (244aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_174_41
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

48545..49519
-----------------
DNA (975bp)
protein (325aa)
homospermidine synthase (EC:2.5.1.45); K00809 deoxyhypusine synthase [EC:2.5.1.46] rbh
deoxyhypusine synthase, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B56714 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_174_42
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49546..50592
-----------------
DNA (1047bp)
protein (349aa)
histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B95F9
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO45087.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_174_43
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(50673..51308)
-----------------
DNA (636bp)
protein (212aa)
Phosphoesterase PA-phosphatase related id=4221893 bin=GWA2_Ignavibacteria-rel_35_8 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
phosphoesterase PA-phosphatase-like protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids2_trim150_scaffold_174_44
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51438..52838)
-----------------
DNA (1401bp)
protein (467aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMU2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03113.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_45
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52868..55666)
-----------------
DNA (2799bp)
protein (933aa)
TonB-dependent receptor n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W6A3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF13518.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
TonB-dependent receptor plug
scnpilot_solids2_trim150_scaffold_174_46
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55815..57068)
-----------------
DNA (1254bp)
protein (418aa)
Phosphate-selective porin O and P n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT9_NIAKG rbh
phosphate-selective porin O and P rbh
Phosphate-selective porin O and P {ECO:0000313|EMBL:AEW03110.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_47
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

57179..57826
-----------------
DNA (648bp)
protein (216aa)
Putative phosphate transport regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT8_NIAKG
Phosphate transport regulator {ECO:0000313|EMBL:KIC94553.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative phosphate transport regulator; K07220 hypothetical protein
scnpilot_solids2_trim150_scaffold_174_48
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

57868..58878
-----------------
DNA (1011bp)
protein (337aa)
inorganic phosphate transporter n=1 Tax=Segetibacter koreensis RepID=UPI000372D83E rbh
phosphate transporter rbh
Phosphate transporter {ECO:0000313|EMBL:AEW01144.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_49
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58929..59984
-----------------
DNA (1056bp)
protein (352aa)
UDP-galactose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose 4-epimerase {ECO:0000313|EMBL:AEW03106.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEW03106.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-galactose 4-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT5_NIAKG
scnpilot_solids2_trim150_scaffold_174_50
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

60026..60718
-----------------
DNA (693bp)
protein (231aa)
peptidase C26 n=1 Tax=Pedobacter agri RepID=UPI000299EDAD
Peptidase C26 {ECO:0000313|EMBL:KIA91931.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
peptidase C26; K07010 putative glutamine amidotransferase
scnpilot_solids2_trim150_scaffold_174_51
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(60784..61737)
-----------------
DNA (954bp)
protein (318aa)
Glycerate dehydrogenase n=1 Tax=Methanococcus maripaludis X1 RepID=G0GZZ9_METMI rbh
glycerate dehydrogenase rbh
Glycerate dehydrogenase {ECO:0000313|EMBL:AEK19880.1}; TaxID=1053692 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis X1.;"
scnpilot_solids2_trim150_scaffold_174_52
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61798..62943)
-----------------
DNA (1146bp)
protein (382aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EF461 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ24176.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids2_trim150_scaffold_174_53
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63037..63618
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO85210.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_solids2_trim150_scaffold_174_54
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63692..64690
-----------------
DNA (999bp)
protein (333aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Segetibacter koreensis RepID=UPI0003824868 rbh
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KIC90296.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
aldo/keto reductase rbh
scnpilot_solids2_trim150_scaffold_174_55
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64727..64981)
-----------------
DNA (255bp)
protein (85aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LXG4_GRAFK
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids2_trim150_scaffold_174_56
unknown

Not on your lists

comp(65018..65257)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_174_57
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(65521..65772)
-----------------
DNA (252bp)
protein (84aa)
ATP synthase F1 subcomplex subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AB3E6
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_174_58
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(65841..67346)
-----------------
DNA (1506bp)
protein (502aa)
ATP synthase F1 subcomplex subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
F0F1 ATP synthase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI00035D04FA rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_174_59
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

67546..67788
-----------------
DNA (243bp)
protein (81aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSX9_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL59265.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_174_60
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67792..68052
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00036799C3
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Displaying items 31-60 of 79 in total

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