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scnpilot_solids2_trim150_scaffold_174

Search features with annotation key words

Displaying items 61-79 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_174_61
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(68089..69618)
-----------------
DNA (1530bp)
protein (510aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036885AE rbh
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEW01887.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_62
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(69682..70095)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003713AA1
class I peptide chain release factor; K15034 ribosome-associated protein
Class I peptide chain release factor {ECO:0000313|EMBL:ACU57914.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_174_63
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

70223..70990
-----------------
DNA (768bp)
protein (256aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] rbh
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL78_NIAKG rbh
Geranylgeranylglyceryl phosphate synthase {ECO:0000313|EMBL:AEW01919.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_64
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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71056..72246
-----------------
DNA (1191bp)
protein (397aa)
Leukocyte elastase inhibitor n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAA6_DICT6
Uncharacterized protein {ECO:0000313|EMBL:KIF33838.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
leukocyte elastase inhibitor; K13963 serpin B
scnpilot_solids2_trim150_scaffold_174_65
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(72357..73949)
-----------------
DNA (1593bp)
protein (531aa)
Peptidase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIF7_NIAKG
peptidase domain-containing protein
Peptidase domain protein {ECO:0000313|EMBL:AEW01773.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_66
unknown

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comp(74010..74456)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_174_67
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(74587..74952)
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIF5_NIAKG
CoA-binding protein {ECO:0000313|EMBL:KIC92815.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K06929
scnpilot_solids2_trim150_scaffold_174_68
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(74949..75356)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Bacillus sp. m3-13 RepID=UPI0001E89520
Thiol-disulfide oxidoreductase {ECO:0000313|EMBL:KJJ38079.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
thiol-disulfide oxidoreductase DCC
scnpilot_solids2_trim150_scaffold_174_69
unknown

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comp(75647..76267)
-----------------
DNA (621bp)
protein (207aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_174_70
unknown

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comp(76257..77198)
-----------------
DNA (942bp)
protein (314aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_174_71
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(77248..78921)
-----------------
DNA (1674bp)
protein (558aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSN7_CHIPD
scnpilot_solids2_trim150_scaffold_174_72
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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79331..80668
-----------------
DNA (1338bp)
protein (446aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] rbh
Glutamate dehydrogenase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS85_PEDHD rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids2_trim150_scaffold_174_73
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80792..81784
-----------------
DNA (993bp)
protein (331aa)
nucleotidyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE23_NIAKG
Nucleotidyl transferase {ECO:0000313|EMBL:AEW03571.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_174_74
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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81907..84300
-----------------
DNA (2394bp)
protein (798aa)
Soluble ligand binding domain protein id=4129192 bin=GWF2_Bacteroidetes_29_10 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes rbh
polysaccharide export protein
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids2_trim150_scaffold_174_75
unknown

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84306..85349
-----------------
DNA (1044bp)
protein (348aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_174_76
unknown

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85399..85557
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_174_77
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

86106..86507
-----------------
DNA (402bp)
protein (134aa)
Transposase n=1 Tax=Niabella soli DSM 19437 RepID=H1NND0_9SPHI
Transposase {ECO:0000313|EMBL:AHF15307.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_174_78
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(86864..87172)
-----------------
DNA (309bp)
protein (103aa)
Transcriptional regulator, XRE family n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AQT1_CHLCH
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB28644.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
scnpilot_solids2_trim150_scaffold_174_79
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(87153..87506)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000373EE6A
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
Displaying items 61-79 of 79 in total

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