name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_175_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..595
----------------- DNA (594bp) protein (198aa) |
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E2_9GAMM
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit {ECO:0000313|EMBL:EIL92933.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c1
|
|
scnpilot_solids2_trim150_scaffold_175_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
658..1299
----------------- DNA (642bp) protein (214aa) |
Stringent starvation protein A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E3_9GAMM
Stringent starvation protein A {ECO:0000313|EMBL:EIL92934.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase
|
|
scnpilot_solids2_trim150_scaffold_175_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1310..1726
----------------- DNA (417bp) protein (139aa) |
peptidase n=1 Tax=Dyella japonica RepID=UPI0002E6954E
Peptidase {ECO:0000313|EMBL:AIF47281.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
stringent starvation protein B
|
|
scnpilot_solids2_trim150_scaffold_175_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1753..2166)
----------------- DNA (414bp) protein (138aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBN6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96877.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF3301)
|
|
scnpilot_solids2_trim150_scaffold_175_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2222..3085)
----------------- DNA (864bp) protein (288aa) |
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KJV30951.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KJV30951.1};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMC0_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_175_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3082..5448)
----------------- DNA (2367bp) protein (789aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99705.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF1631)
|
|
scnpilot_solids2_trim150_scaffold_175_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5572..5844)
----------------- DNA (273bp) protein (91aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMC2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88363.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_175_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5910..6413
----------------- DNA (504bp) protein (168aa) |
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thio
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR2_9GAMM
5-(carboxyamino)imidazole ribonucleotide mutase
|
|
scnpilot_solids2_trim150_scaffold_175_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6410..7573
----------------- DNA (1164bp) protein (388aa) |
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR1_9GAMM
5-(carboxyamino)imidazole ribonucleotide synthase
|
|
scnpilot_solids2_trim150_scaffold_175_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7758..8336)
----------------- DNA (579bp) protein (193aa) |
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Superoxide dismutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR0_9GAMM
superoxide dismutase
|
|
scnpilot_solids2_trim150_scaffold_175_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8463..8786
----------------- DNA (324bp) protein (108aa) |
Glutaredoxin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJQ9_9GAMM
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
monothiol glutaredoxin, Grx4 family
|
|
scnpilot_solids2_trim150_scaffold_175_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8783..9553
----------------- DNA (771bp) protein (257aa) |
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMC7_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL88368.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
|
|
scnpilot_solids2_trim150_scaffold_175_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9603..10205
----------------- DNA (603bp) protein (201aa) |
Membrane protein, MarC family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMC8_9GAMM
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multiple antibiotic transporter
|
|
scnpilot_solids2_trim150_scaffold_175_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10314..11717
----------------- DNA (1404bp) protein (468aa) |
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F7_9GAMM
putative Rossmann fold nucleotide-binding protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_175_trna_1
unknown
|
Not on your lists |
11798..11871
----------------- DNA (74bp) |
transferRNA Asn
|
|
scnpilot_solids2_trim150_scaffold_175_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
12073..13701
----------------- DNA (1629bp) protein (543aa) |
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12]
rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase id=4770557 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
scnpilot_solids2_trim150_scaffold_175_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13934..15451
----------------- DNA (1518bp) protein (506aa) |
Major anaerobically induced outer membrane transmembrane protein (Fragment) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYT9_9GAMM
rbh
Major anaerobically induced outer membrane transmembrane protein {ECO:0000313|EMBL:EIL92380.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dissimilatory nitrite reductase (NO-forming), copper type apoprotein
rbh
|
|
scnpilot_solids2_trim150_scaffold_175_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15451..16257
----------------- DNA (807bp) protein (269aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWG6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91557.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_175_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16254..16847
----------------- DNA (594bp) protein (198aa) |
SCO1/SenC family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Q3_9GAMM
SCO1/SenC family protein {ECO:0000313|EMBL:EIL93394.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
|
|
scnpilot_solids2_trim150_scaffold_175_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16874..18163
----------------- DNA (1290bp) protein (430aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQZ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89996.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_175_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18469..19251)
----------------- DNA (783bp) protein (261aa) |
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWJ2_9GAMM
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EIL91583.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cAMP-binding protein
|
|
scnpilot_solids2_trim150_scaffold_175_21
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19485..20789)
----------------- DNA (1305bp) protein (435aa) |
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C8E8F
Transporter {ECO:0000313|EMBL:AHX13567.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane efflux protein
|
|
scnpilot_solids2_trim150_scaffold_175_22
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20786..21097)
----------------- DNA (312bp) protein (104aa) |
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDCF1
Uncharacterized protein {ECO:0000313|EMBL:KGI76678.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_175_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21097..24177)
----------------- DNA (3081bp) protein (1027aa) |
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FF74
Cytochrome C peroxidase {ECO:0000313|EMBL:KGI76679.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
CzcA family heavy metal efflux protein
|
|
scnpilot_solids2_trim150_scaffold_175_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24179..25231)
----------------- DNA (1053bp) protein (351aa) |
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9F8_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:KGI76813.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
RND family efflux transporter MFP subunit
|
|
scnpilot_solids2_trim150_scaffold_175_25
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25292..26695)
----------------- DNA (1404bp) protein (468aa) |
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B2F87
Uncharacterized protein {ECO:0000313|EMBL:KGI76680.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
histidine kinase
|
|
scnpilot_solids2_trim150_scaffold_175_26
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26682..27347)
----------------- DNA (666bp) protein (222aa) |
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003694ADC
Transcriptional regulator {ECO:0000313|EMBL:KGI76681.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
winged helix family two component transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_175_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27516..28658
----------------- DNA (1143bp) protein (381aa) |
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D4D187
rbh
ABC transporter permease {ECO:0000313|EMBL:AHX12045.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein; K02066 putative ABC transport system permease protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_175_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28655..29467
----------------- DNA (813bp) protein (271aa) |
iron ABC transporter ATP-binding protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036E3EAE
rbh
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX12044.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC transporter ATP-binding protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_175_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29469..30407
----------------- DNA (939bp) protein (313aa) |
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030BBC58
rbh
ABC transporter permease {ECO:0000313|EMBL:AHX12043.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
rbh
|