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scnpilot_solids2_trim150_scaffold_802

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_802_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..2018
DNA (2016bp) protein (672aa)
RHS repeat-associated core domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAC6_9GAMM rbh
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AGG87415.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
RHS repeat-associated core domain protein rbh
scnpilot_solids2_trim150_scaffold_802_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2063..4276
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX53_9GAMM rbh
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AGG87415.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
RHS repeat-associated core domain protein
scnpilot_solids2_trim150_scaffold_802_3
unknown

Not on your lists

4855..6072
DNA (1218bp) protein (406aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_802_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6285..7391)
DNA (1107bp) protein (369aa)
Hexosyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCW0_9GAMM rbh
Hexosyltransferase {ECO:0000313|EMBL:EIL97301.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_802_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7388..8503)
DNA (1116bp) protein (372aa)
Glycosyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV9_9GAMM rbh
Glycosyltransferase {ECO:0000313|EMBL:EIL97300.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_802_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8519..10030)
DNA (1512bp) protein (504aa)
Radical SAM protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV8_9GAMM rbh
Radical SAM protein {ECO:0000313|EMBL:EIL97299.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Fe-S oxidoreductase
scnpilot_solids2_trim150_scaffold_802_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10055..10753)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97298.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_solids2_trim150_scaffold_802_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10750..11985)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97297.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytosine deaminase-like metal-dependent hydrolase
scnpilot_solids2_trim150_scaffold_802_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11989..12837)
DNA (849bp) protein (283aa)
Methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT55_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_802_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12908..13747)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT56_9GAMM
uncharacterized protein involved in exopolysaccharide biosynthesis
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_802_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13734..14897)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97539.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_802_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14894..15835)
DNA (942bp) protein (314aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ7_9GAMM rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL97538.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyl transferase
scnpilot_solids2_trim150_scaffold_802_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15838..17088)
DNA (1251bp) protein (417aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ6_9GAMM rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL97537.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protein involved in the export of O-antigen and teichoic acid
scnpilot_solids2_trim150_scaffold_802_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17085..18227)
DNA (1143bp) protein (381aa)
Aminotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ5_9GAMM rbh
Aminotransferase {ECO:0000313|EMBL:EIL97536.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
scnpilot_solids2_trim150_scaffold_802_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18227..19159)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97535.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_802_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19146..20093)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97534.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_802_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20101..20766)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97533.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
scnpilot_solids2_trim150_scaffold_802_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20751..21188)
DNA (438bp) protein (146aa)
NDP-hexose isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ1_9GAMM
NDP-hexose isomerase {ECO:0000313|EMBL:EIL97532.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme
scnpilot_solids2_trim150_scaffold_802_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21466..22356
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97531.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_802_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22435..23019
DNA (585bp) protein (195aa)
RNA polymerase sigma-E factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI9_9GAMM rbh
RNA polymerase sigma-E factor {ECO:0000313|EMBL:EIL97530.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids2_trim150_scaffold_802_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23016..23648
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97529.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_802_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23645..24934
DNA (1290bp) protein (430aa)
Serine protease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI7_9GAMM rbh
Serine protease {ECO:0000313|EMBL:EIL97528.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
subtilisin-like serine protease
scnpilot_solids2_trim150_scaffold_802_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25038..25421
DNA (384bp) protein (128aa)
DnaK suppressor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA55_9GAMM
DnaK suppressor protein
DnaK suppressor protein {ECO:0000313|EMBL:AGG87285.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 23 items

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