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scnpilot_solids2_trim150_scaffold_82

Search features with annotation key words

Displaying items 121-150 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_82_120
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

125803..126201
-----------------
DNA (399bp)
protein (133aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003102A1B
Uncharacterized protein {ECO:0000313|EMBL:KJL34285.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_121
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(126331..127800)
-----------------
DNA (1470bp)
protein (490aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L1B3_9MICO rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89152.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
putative peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
scnpilot_solids2_trim150_scaffold_82_122
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

127924..128619
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQZ7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ55241.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_123
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(128744..129160)
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein n=1 Tax=Corynebacterium glutamicum (strain R) RepID=A4QD08_CORGB
Glyoxalase-like domain protein {ECO:0000313|EMBL:KJL25826.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K07032
scnpilot_solids2_trim150_scaffold_82_124
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


129362..130747
-----------------
DNA (1386bp)
protein (462aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glyS; glycyl-tRNA synthetase (class II); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] rbh
glycine-tRNA synthetase subunit beta n=1 Tax=Microbacterium barkeri RepID=UPI00037EB44C rbh
scnpilot_solids2_trim150_scaffold_82_125
unknown

Not on your lists

comp(130880..130984)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_82_126
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131208..134279)
-----------------
DNA (3072bp)
protein (1024aa)
Mannosylglycerate hydrolase {ECO:0000313|EMBL:KJL34270.1}; EC=3.2.1.170 {ECO:0000313|EMBL:KJL34270.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glycoside hydrolase family protein; K01191 alpha-mannosidase [EC:3.2.1.24] rbh
alpha-mannosidase n=1 Tax=Microbacterium barkeri RepID=UPI000307F0C6 rbh
scnpilot_solids2_trim150_scaffold_82_127
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(134297..135607)
-----------------
DNA (1311bp)
protein (437aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0X4_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL34266.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_82_128
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

135703..136179
-----------------
DNA (477bp)
protein (159aa)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:KJL34352.1}; EC=2.7.7.39 {ECO:0000313|EMBL:KJL34352.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2H7N1_9SPHI
cytidyltransferase
scnpilot_solids2_trim150_scaffold_82_129
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136214..136879
-----------------
DNA (666bp)
protein (222aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB23_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL34272.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_82_130
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136938..137162
-----------------
DNA (225bp)
protein (75aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000318D633
hypothetical protein
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EGE76928.1}; TaxID=765064 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes HL097PA1.;"
scnpilot_solids2_trim150_scaffold_82_131
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

137159..137542
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000318D633
PIN domain protein {ECO:0000313|EMBL:EJF38904.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_132
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(137625..138035)
-----------------
DNA (411bp)
protein (137aa)
ribosomal subunit interface protein n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B61607
Ribosomal subunit interface protein {ECO:0000313|EMBL:KHK99794.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
arr; rifampin ADP-ribosyl transferase
scnpilot_solids2_trim150_scaffold_82_133
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138173..138604)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D2C0B
Uncharacterized protein {ECO:0000313|EMBL:KJL22269.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_134
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138750..140045)
-----------------
DNA (1296bp)
protein (432aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036BE722 rbh
scnpilot_solids2_trim150_scaffold_82_135
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

140150..141163
-----------------
DNA (1014bp)
protein (338aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hemE; uroporphyrinogen-III decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] rbh
uroporphyrinogen decarboxylase n=1 Tax=Microbacterium barkeri RepID=UPI00030AFF77 rbh
scnpilot_solids2_trim150_scaffold_82_136
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

141200..142714
-----------------
DNA (1515bp)
protein (505aa)
protoporphyrinogen oxidase; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L1C1_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_82_137
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

142817..143149
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FAD93A
Uncharacterized protein {ECO:0000313|EMBL:KJL34250.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_138
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

143151..143558
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DCC953
Uncharacterized protein {ECO:0000313|EMBL:EYT60340.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_139
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

143545..143835
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347E52A
Uncharacterized protein {ECO:0000313|EMBL:KJQ55226.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_140
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

143911..144603
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR09_9MICO
Putative heme peroxidase {ECO:0000313|EMBL:KJL30372.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K09162 hypothetical protein
scnpilot_solids2_trim150_scaffold_82_141
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

144600..145580
-----------------
DNA (981bp)
protein (327aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DE2D4C rbh
scnpilot_solids2_trim150_scaffold_82_142
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145591..146388
-----------------
DNA (798bp)
protein (266aa)
uroporphyrinogen-III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] rbh
Uroporphyrinogen III synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L698_9MICO rbh
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KJL30370.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_82_143
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

146385..147362
-----------------
DNA (978bp)
protein (326aa)
hemB; delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
Delta-aminolevulinic acid dehydratase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L4C7_9MICO rbh
Delta-aminolevulinic acid dehydratase {ECO:0000313|EMBL:EQM86101.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_82_144
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

147538..148860
-----------------
DNA (1323bp)
protein (441aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glutamate-1-semialdehyde aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
glutamate-1-semialdehyde aminotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003479E5D rbh
scnpilot_solids2_trim150_scaffold_82_145
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148954..150120
-----------------
DNA (1167bp)
protein (389aa)
AAA ATPase n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZIR4_9PROT rbh
AAA ATPase rbh
AAA ATPase {ECO:0000313|EMBL:ADZ25181.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
scnpilot_solids2_trim150_scaffold_82_146
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

150224..150670
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003614171
Uncharacterized protein {ECO:0000313|EMBL:KJL24145.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_147
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150684..152576)
-----------------
DNA (1893bp)
protein (631aa)
Putative ABC transporter ATP-binding protein YxlF {ECO:0000313|EMBL:KJL22028.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL22028.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L6A2_9MICO rbh
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_82_148
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

152688..153746
-----------------
DNA (1059bp)
protein (353aa)
enoyl-CoA hydratase/carnithine racemase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C60AB rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89171.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_82_149
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153954..155111)
-----------------
DNA (1158bp)
protein (386aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CMI9_CLAM3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN00275.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Displaying items 121-150 of 252 in total

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