ggKbase home page

scnpilot_solids2_trim150_scaffold_82

Search features with annotation key words

Displaying items 151-180 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_82_150
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155294..157021
-----------------
DNA (1728bp)
protein (576aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034880AB rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KDA06773.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
multidrug ABC transporter ATPase/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids2_trim150_scaffold_82_151
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

157018..159195
-----------------
DNA (2178bp)
protein (726aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D96B45 rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJL34238.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
multidrug ABC transporter ATPase/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids2_trim150_scaffold_82_152
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(159425..160873)
-----------------
DNA (1449bp)
protein (483aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L1D4_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM86109.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
D-alanyl-D-alanine carboxypeptidase rbh
scnpilot_solids2_trim150_scaffold_82_153
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

161198..161839
-----------------
DNA (642bp)
protein (214aa)
membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003737BEF rbh
Membrane protein {ECO:0000313|EMBL:KDA06772.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_82_154
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

161842..163299
-----------------
DNA (1458bp)
protein (486aa)
Putative HMP/thiamine import ATP-binding protein YkoD {ECO:0000313|EMBL:KJQ55209.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ55209.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L4D7_9MICO rbh
cobalt ABC transporter ATPase; K02006 cobalt/nickel transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_82_155
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

163296..164078
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036477AB rbh
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000313|EMBL:KJQ55208.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
cobalt ABC transporter permease; K02008 cobalt/nickel transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_82_156
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164117..164632
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034D9F16
Uncharacterized protein {ECO:0000313|EMBL:KJL44754.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_157
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164636..164998)
-----------------
DNA (363bp)
protein (121aa)
uroporphyrin-III C-methyltransferase n=1 Tax=Nesterenkonia sp. F RepID=UPI000255CFFE
Uncharacterized protein {ECO:0000313|EMBL:KDA06769.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_158
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

165124..165885
-----------------
DNA (762bp)
protein (254aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:KJL22000.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJL22000.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E8259 rbh
dehydrogenase with different specificities rbh
scnpilot_solids2_trim150_scaffold_82_159
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

165925..166755
-----------------
DNA (831bp)
protein (277aa)
short-chain dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI000316E961 rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89177.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
dehydrogenase with different specificities; K13775 citronellol/citronellal dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_82_160
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166777..167508)
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L4E7_9MICO rbh
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:KJQ55204.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K07090
scnpilot_solids2_trim150_scaffold_82_161
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(167505..168143)
-----------------
DNA (639bp)
protein (213aa)
2-dehydro-3-deoxyphosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003489B95 rbh
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KDA06766.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_82_162
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

168297..169517
-----------------
DNA (1221bp)
protein (407aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
Fe-S-cluster redox enzyme; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] rbh
50S rRNA methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0003147281 rbh
scnpilot_solids2_trim150_scaffold_82_163
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

169626..171176
-----------------
DNA (1551bp)
protein (517aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D2F860 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL26943.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_82_164
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(171182..171961)
-----------------
DNA (780bp)
protein (260aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361274A rbh
Lipoprotein {ECO:0000313|EMBL:EYT59605.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
Membrane-associated lipoprotein
scnpilot_solids2_trim150_scaffold_82_165
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(171958..172509)
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379AFBC
FMN-binding protein {ECO:0000313|EMBL:KHK96416.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_166
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172541..173959)
-----------------
DNA (1419bp)
protein (473aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036BAEEC rbh
Oxidoreductase {ECO:0000313|EMBL:KHK96417.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ferric reductase
scnpilot_solids2_trim150_scaffold_82_167
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(174047..174655)
-----------------
DNA (609bp)
protein (203aa)
Translation initiation factor IF-2 n=1 Tax=Arthrobacter aurescens (strain TC1) RepID=IF2_ARTAT
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
scnpilot_solids2_trim150_scaffold_82_168
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(174752..175747)
-----------------
DNA (996bp)
protein (332aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000370EAB7 rbh
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_82_169
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(175744..176403)
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003794751 rbh
Response regulator {ECO:0000313|EMBL:KHK99516.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein
scnpilot_solids2_trim150_scaffold_82_170
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

176462..177475
-----------------
DNA (1014bp)
protein (338aa)
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KJL38289.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL38289.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Aldo/keto reductase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L2A4_9MICO rbh
oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_82_171
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(177500..178882)
-----------------
DNA (1383bp)
protein (461aa)
glycolate oxidase (EC:1.1.2.4); K00104 glycolate oxidase [EC:1.1.3.15] rbh
Glycolate oxidase FAD-linked subunit n=1 Tax=Brevibacterium casei S18 RepID=K9AX74_9MICO rbh
Glycolate oxidase FAD-linked subunit {ECO:0000313|EMBL:EKU46125.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
scnpilot_solids2_trim150_scaffold_82_172
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(178879..179388)
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR38_9MICO
Glycine cleavage system transcriptional repressor {ECO:0000313|EMBL:KJL38288.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glycine cleavage system regulatory protein
scnpilot_solids2_trim150_scaffold_82_173
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(179393..180454)
-----------------
DNA (1062bp)
protein (354aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] rbh
cysteine synthase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C572F rbh
Cysteine synthase {ECO:0000313|EMBL:EYT60303.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids2_trim150_scaffold_82_174
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(180503..180904)
-----------------
DNA (402bp)
protein (134aa)
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89192.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_82_175
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(181286..181822)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEM7_9MICO
CGNR zinc finger {ECO:0000313|EMBL:KJL20312.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_176
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

181862..182836
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJN4_9MICO rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89215.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_82_177
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(182965..183732)
-----------------
DNA (768bp)
protein (256aa)
ABC transporter permease n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003497223 rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_82_178
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(183729..184484)
-----------------
DNA (756bp)
protein (252aa)
ABC transporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034891E6 rbh
Glycosyl transferase family 8 {ECO:0000313|EMBL:EYT60794.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_82_179
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(184481..184849)
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TVB3_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KJL33547.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
Displaying items 151-180 of 252 in total

View Taxonomy