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scnpilot_solids2_trim150_scaffold_82

Search features with annotation key words

Displaying items 241-252 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_82_240
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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253019..253858
-----------------
DNA (840bp)
protein (280aa)
ABC transporter permease n=1 Tax=Leifsonia sp. 109 RepID=UPI0003782D1A rbh
ABC transporter permease {ECO:0000313|EMBL:EYT64794.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
Binding-protein-dependent transport systems inner membrane component rbh
scnpilot_solids2_trim150_scaffold_82_241
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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253855..255762
-----------------
DNA (1908bp)
protein (636aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036A2F30 rbh
Mannan endo-1,4-beta-mannosidase rbh
Mannan endo-1,4-beta-mannosidase {ECO:0000313|EMBL:AFV90860.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
scnpilot_solids2_trim150_scaffold_82_242
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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255805..256830
-----------------
DNA (1026bp)
protein (342aa)
LacI family transcription regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B679E5 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY02745.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_82_243
unknown

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256916..257191
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B5E1AE
scnpilot_solids2_trim150_scaffold_82_244
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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257188..257625
-----------------
DNA (438bp)
protein (146aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
nucleotide-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B2E685
nucleic acid-binding protein
scnpilot_solids2_trim150_scaffold_82_245
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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257785..258648
-----------------
DNA (864bp)
protein (288aa)
amidinotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346E217 rbh
Amidinotransferase {ECO:0000313|EMBL:KJL27413.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
N-Dimethylarginine dimethylaminohydrolase rbh
scnpilot_solids2_trim150_scaffold_82_246
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(258673..260652)
-----------------
DNA (1980bp)
protein (660aa)
choline transporter n=1 Tax=Agromyces italicus RepID=UPI0003B4AD6D rbh
Choline transporter {ECO:0000313|EMBL:KIC58747.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
choline/carnitine/betaine transport; K02168 high-affinity choline transport protein rbh
scnpilot_solids2_trim150_scaffold_82_247
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(260609..261085)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003463C2C
MarR family protein {ECO:0000313|EMBL:KJL36458.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_248
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(261110..262720)
-----------------
DNA (1611bp)
protein (537aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFC5_9MICO rbh
ABC-2 family transporter protein {ECO:0000313|EMBL:KJL27416.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
exporter of polyketide antibiotics; K09686 antibiotic transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_82_249
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(262717..263715)
-----------------
DNA (999bp)
protein (333aa)
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA {ECO:0000313|EMBL:KJL27417.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL27417.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364C5A5 rbh
ABC transporter; K09687 antibiotic transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_82_250
unknown

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263826..264374
-----------------
DNA (549bp)
protein (183aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B4285C
scnpilot_solids2_trim150_scaffold_82_251
unknown

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comp(264371..264466)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

Displaying items 241-252 of 252 in total

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