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scnpilot_solids2_trim150_scaffold_166

Search features with annotation key words

Displaying items 61-90 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_166_61
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63974..64744)
-----------------
DNA (771bp)
protein (257aa)
UPF0271 protein L687_14760 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQP9_9MICO
UPF0271 protein L687_14760 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
LamB/YcsF family protein; K07160 UPF0271 protein
scnpilot_solids2_trim150_scaffold_166_62
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64780..66054)
-----------------
DNA (1275bp)
protein (425aa)
membrane protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FD2430 rbh
Membrane protein {ECO:0000313|EMBL:EQM80757.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_166_63
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66157..66795
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCK7_9MICO rbh
Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:KJL25449.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_166_64
Corynebacterium glyciniphilum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66829..67080)
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein n=1 Tax=Brevibacterium linens RepID=UPI0001BC2BD2
ATPase (AAA+ superfamily)-like protein {ECO:0000313|EMBL:AHW62615.1}; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum AJ 3170.;"
ATPase (AAA+ superfamily)-like protein; K07133
scnpilot_solids2_trim150_scaffold_166_65
unknown

Not on your lists

67249..67923
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_166_66
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68472..69470)
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CBDE9 rbh
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93657.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_166_67
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69532..70965)
-----------------
DNA (1434bp)
protein (478aa)
Beta-glucosidase A {ECO:0000313|EMBL:KJL27281.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KJL27281.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase; K05350 beta-glucosidase [EC:3.2.1.21] rbh
beta-glucosidase n=1 Tax=Microbacterium yannicii RepID=UPI0002E00C98 rbh
scnpilot_solids2_trim150_scaffold_166_68
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71031..71549
-----------------
DNA (519bp)
protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
adenine/guanine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
adenine phosphoribosyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D9820
scnpilot_solids2_trim150_scaffold_166_69
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71706..72374)
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HBS6_STRA9
MerR family transcriptional regulator {ECO:0000313|EMBL:EXU88001.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_166_70
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72663..72911
-----------------
DNA (249bp)
protein (83aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA3
phosphoribosylformylglycinamidine (FGAM) synthase, PurS component; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMS8_9MICO
scnpilot_solids2_trim150_scaffold_166_71
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72908..73615
-----------------
DNA (708bp)
protein (236aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=582680 species=
purQ; phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
phosphoribosylformylglycinamidine synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002F1AE59 rbh
scnpilot_solids2_trim150_scaffold_166_72
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(73779..74210)
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNK1_9MICO
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_166_73
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74302..75060)
-----------------
DNA (759bp)
protein (253aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347DC52 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KHK96220.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
short-chain dehydrogenase/reductase SDR rbh
scnpilot_solids2_trim150_scaffold_166_74
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(75091..76413)
-----------------
DNA (1323bp)
protein (441aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0A3_9MICO rbh
ATP-NAD/AcoX kinase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_166_75
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76410..78020)
-----------------
DNA (1611bp)
protein (537aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glycine dehydrogenase subunit 2; K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2]
glycine dehydrogenase subunit 2 n=1 Tax=Agromyces subbeticus RepID=UPI0003B37C55 rbh
scnpilot_solids2_trim150_scaffold_166_76
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78017..79405)
-----------------
DNA (1389bp)
protein (463aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glycine dehydrogenase (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DED5B rbh
scnpilot_solids2_trim150_scaffold_166_77
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79402..81555)
-----------------
DNA (2154bp)
protein (718aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
beta-galactosidase (EC:3.2.1.23); K12308 beta-galactosidase [EC:3.2.1.23] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C3056 rbh
scnpilot_solids2_trim150_scaffold_166_78
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81601..82257
-----------------
DNA (657bp)
protein (219aa)
GntR family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B31695
DNA-binding transcriptional repressor LldR {ECO:0000313|EMBL:KJL33452.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_166_79
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82305..83198)
-----------------
DNA (894bp)
protein (298aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B5BD1A rbh
Lactose transport system permease protein LacG {ECO:0000313|EMBL:KJL33451.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transporter inner membrane component; K10190 lactose/L-arabinose transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_166_80
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83195..84028)
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003816788 rbh
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJL33450.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transporter inner membrane component; K10189 lactose/L-arabinose transport system permease protein
scnpilot_solids2_trim150_scaffold_166_81
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84189..85511)
-----------------
DNA (1323bp)
protein (441aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L577_9MICO rbh
Lactose-binding protein {ECO:0000313|EMBL:KJL33449.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
family 1 extracellular solute-binding protein; K10188 lactose/L-arabinose transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_166_82
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85692..86441)
-----------------
DNA (750bp)
protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WMX7_ACTMD rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU38490.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids2_trim150_scaffold_166_83
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86441..87217)
-----------------
DNA (777bp)
protein (259aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
ABC transporter n=1 Tax=Actinomadura flavalba RepID=UPI0003788217
ABC transporter related protein {ECO:0000313|EMBL:ACY99214.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
scnpilot_solids2_trim150_scaffold_166_84
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87214..88203)
-----------------
DNA (990bp)
protein (330aa)
amino acid ABC transporter permease n=1 Tax=Nonomuraea coxensis RepID=UPI0003820A1F rbh
polar amino acid ABC transporter inner membrane protein rbh
Polar amino acid ABC transporter inner membrane protein {ECO:0000313|EMBL:ACZ87457.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_166_85
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88205..89158)
-----------------
DNA (954bp)
protein (318aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003777C88
amino acid ABC transporter; K02030 polar amino acid transport system substrate-binding protein
Amino acid ABC transporter {ECO:0000313|EMBL:ACZ87456.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_166_86
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89169..90761)
-----------------
DNA (1593bp)
protein (531aa)
Amidohydrolase 3 n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RY59_MICSL
amidohydrolase 3; K07047
Amidohydrolase 3 {ECO:0000313|EMBL:ADL46202.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
scnpilot_solids2_trim150_scaffold_166_87
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90918..91853
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003730EB4 rbh
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:KDA04683.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
phosphoglycerate dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_166_88
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

92000..93661
-----------------
DNA (1662bp)
protein (554aa)
glycosidase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
alpha-glucosidase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F6A4 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_166_89
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

93675..94676
-----------------
DNA (1002bp)
protein (334aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E0D101 rbh
transcriptional regulator rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_166_90
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94709..96937)
-----------------
DNA (2229bp)
protein (743aa)
glycoside hydrolase 3 domain protein; K05349 beta-glucosidase [EC:3.2.1.21] rbh
Beta-D-glucosideglucohydrolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCM9_9MICO rbh
Beta-D-glucosideglucohydrolase {ECO:0000313|EMBL:KDA04684.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Displaying items 61-90 of 134 in total

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