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scnpilot_solids2_trim150_scaffold_166

Search features with annotation key words

Displaying items 91-120 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_166_91
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96934..97989)
-----------------
DNA (1056bp)
protein (352aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQ05_LEIAQ rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:KJL21812.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_166_92
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97991..99118)
-----------------
DNA (1128bp)
protein (376aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZH7_LEIAQ rbh
Nickel transport system permease protein NikB {ECO:0000313|EMBL:KJL21813.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_166_93
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99115..99918)
-----------------
DNA (804bp)
protein (268aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7H7_LEIAQ rbh
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJL21814.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter; K02032 peptide/nickel transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_166_94
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99915..100739)
-----------------
DNA (825bp)
protein (275aa)
Dipeptide ABC transporter, ATP-binding protein DppD family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP84_LEIAQ rbh
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJL21815.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_166_95
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100832..102502)
-----------------
DNA (1671bp)
protein (557aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R5X4_LEIAQ rbh
Oligopeptide-binding protein OppA {ECO:0000313|EMBL:KJL21816.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein family 5 protein; K02035 peptide/nickel transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_166_96
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102670..103311
-----------------
DNA (642bp)
protein (214aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AD76C rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KDA04690.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_166_97
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103916..104119)
-----------------
DNA (204bp)
protein (68aa)
cold-shock protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B70C1C
cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family)
Uncharacterized protein {ECO:0000313|EMBL:KEP75072.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_solids2_trim150_scaffold_166_98
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

104509..105723
-----------------
DNA (1215bp)
protein (405aa)
Putative hydrolase YxeP {ECO:0000313|EMBL:KJL33422.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL33422.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
metal-dependent amidase/aminoacylase/carboxypeptidase; K01451 hippurate hydrolase [EC:3.5.1.32] rbh
Amidohydrolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KSR6_9MICO rbh
scnpilot_solids2_trim150_scaffold_166_99
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105843..107099
-----------------
DNA (1257bp)
protein (419aa)
AAA family ATPase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W4M8_9ACTO rbh
AAA family ATPase {ECO:0000313|EMBL:ENO17490.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
hypothetical protein; K07133 rbh
scnpilot_solids2_trim150_scaffold_166_100
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107104..107772)
-----------------
DNA (669bp)
protein (223aa)
GTP pyrophosphokinase YwaC {ECO:0000313|EMBL:KJL21827.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJL21827.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003027C7D
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_166_101
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107916..110006
-----------------
DNA (2091bp)
protein (697aa)
DNA-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034604DF rbh
Low-affinity putrescine importer PlaP {ECO:0000313|EMBL:KJL33419.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
amino acid transporters rbh
scnpilot_solids2_trim150_scaffold_166_102
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

110075..110692
-----------------
DNA (618bp)
protein (206aa)
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQP7_NOCSJ
N-acetyltransferase GCN5
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_166_103
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110816..113032)
-----------------
DNA (2217bp)
protein (739aa)
copper/silver-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Kocuria palustris PEL RepID=M2YEI7_9MICC rbh
ATPase {ECO:0000313|EMBL:KHK97102.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_solids2_trim150_scaffold_166_104
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113252..115552)
-----------------
DNA (2301bp)
protein (767aa)
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
carbonate dehydratase n=1 Tax=Brevibacterium sp. JC43 RepID=UPI00031A09D5 rbh
Contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94703.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_166_105
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(115578..115787)
-----------------
DNA (210bp)
protein (70aa)
UPI0003C7FA52 related cluster n=1 Tax=unknown RepID=UPI0003C7FA52
Putative copper chaperone CopZ {ECO:0000313|EMBL:GAB91205.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
heavy metal-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_166_106
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(115879..116907)
-----------------
DNA (1029bp)
protein (343aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003625673
Diguanylate cyclase {ECO:0000313|EMBL:EYT56650.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
diguanylate cyclase
scnpilot_solids2_trim150_scaffold_166_107
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

117100..117810
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B76EE9
response regulator receiver modulated diguanylate phosphodiesterase
Tax=RBG_16_RIF_CHLX_72_14_curated
scnpilot_solids2_trim150_scaffold_166_108
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117817..119628)
-----------------
DNA (1812bp)
protein (604aa)
Beta-galactosidase {ECO:0000313|EMBL:KJL33397.1}; EC=3.2.1.23 {ECO:0000313|EMBL:KJL33397.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SC3A7.15; beta-galactosidase; K12308 beta-galactosidase [EC:3.2.1.23] rbh
Beta-galactosidase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KND6_9MICO rbh
scnpilot_solids2_trim150_scaffold_166_109
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

119723..120379
-----------------
DNA (657bp)
protein (219aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZS7_CELFA
DNA alkylation repair enzyme {ECO:0000313|EMBL:KJL21849.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_166_110
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(120527..121651)
-----------------
DNA (1125bp)
protein (375aa)
putative 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] rbh
Putative 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase {ECO:0000313|EMBL:BAK35570.1}; EC=2.1.2.3 {ECO:0000313|EMBL:BAK35570.1};; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Putative 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XGT8_MICPN rbh
scnpilot_solids2_trim150_scaffold_166_111
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(121764..122705)
-----------------
DNA (942bp)
protein (314aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DD35D rbh
Siderophore-interacting protein {ECO:0000313|EMBL:KDA04701.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_166_112
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(122695..123495)
-----------------
DNA (801bp)
protein (267aa)
cobalamin/Fe3+-siderophore ABC transporter ATPase; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
iron-dicitrate ABC transporter ATP-binding protein n=1 Tax=Microbacterium barkeri RepID=UPI0003086E04 rbh
Putative siderophore transport system ATP-binding protein YusV {ECO:0000313|EMBL:KJL26831.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_166_113
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(123492..124550)
-----------------
DNA (1059bp)
protein (353aa)
ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L334_9MICO rbh
ABC transporter permease {ECO:0000313|EMBL:KDA04703.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
fecCD transport family protein rbh
scnpilot_solids2_trim150_scaffold_166_114
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(124547..125587)
-----------------
DNA (1041bp)
protein (347aa)
ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0Z1_9MICO rbh
ABC transporter permease {ECO:0000313|EMBL:EQM85682.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ABC-transport system, membrane integral subunit rbh
scnpilot_solids2_trim150_scaffold_166_115
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(125584..126606)
-----------------
DNA (1023bp)
protein (341aa)
ABC transporter substrate-binding protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629A9C rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_166_116
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(126711..127751)
-----------------
DNA (1041bp)
protein (347aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L339_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM85686.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_166_117
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

127807..128517
-----------------
DNA (711bp)
protein (237aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
purine-nucleoside phosphorylase (EC:2.4.2.1); K03784 purine-nucleoside phosphorylase [EC:2.4.2.1] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FE6185 rbh
scnpilot_solids2_trim150_scaffold_166_118
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

128600..129637
-----------------
DNA (1038bp)
protein (346aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00037D99BB rbh
Membrane protein {ECO:0000313|EMBL:EYT57753.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_166_119
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

129725..132202
-----------------
DNA (2478bp)
protein (826aa)
ATP-dependent RNA helicase (EC:3.6.1.-) rbh
DEAD/DEAH box helicase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L543_9MICO rbh
Ski2-like helicase {ECO:0000313|EMBL:KJL33394.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_166_120
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132331..133830)
-----------------
DNA (1500bp)
protein (500aa)
short-chain dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D2956 rbh
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KJL27275.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative short-chain dehydrogenase/oxidoreductase rbh
Displaying items 91-120 of 134 in total

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