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scnpilot_solids2_trim150_scaffold_50_64

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 52918..53403

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Microbacterium barkeri RepID=UPI0002D2D517 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 162.0
  • Bit_score: 275
  • Evalue 3.30e-71
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 162.0
  • Bit_score: 277
  • Evalue 9.40e-72
transcription elongation factor; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 162.0
  • Bit_score: 244
  • Evalue 2.00e-62

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Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GTGTCCACAGACGCTCAGGTACCTTTCCTCACGCAGGAGGCCTACGACCGGCTCGTCGAAGAGCTGGAGTATCTCTCCACCACCGGTCGCGAGGAGATCGCGGCGCGCATCGAGGCTGCCCGTGAAGAGGGCGACCTGCGGGAGAACGGCGGCTACCACGCCGCCAAGGACGAGCAGGGCAAGCAGGAGTCCCGCATCGTCACACTGCAGCAGCTGCTGAAGACCGCGAAGGTCGGCGAGGCGCCGGTCAGTCGCGGCATCGTCGAGCCCGGCACCGTGGTCACCGCGATCGTCGCCGGCGACGAGGAGGTCTTCCTCCTCGGCAGCCGCGAGATCGCCGGCGGCGACCTCGACGTCTACAGCGAGGCCAGCCCGCTGGGCCAGGCCGTCCTCGGCCTGAAGATCGGCGAGAAGACCTCCTACGAGGCGCCCAACGGCCGGTCGATCTCCGTCGAGGTCACCGGTGTGGAGACCTACACCGGCTGA
PROTEIN sequence
Length: 162
VSTDAQVPFLTQEAYDRLVEELEYLSTTGREEIAARIEAAREEGDLRENGGYHAAKDEQGKQESRIVTLQQLLKTAKVGEAPVSRGIVEPGTVVTAIVAGDEEVFLLGSREIAGGDLDVYSEASPLGQAVLGLKIGEKTSYEAPNGRSISVEVTGVETYTG*