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scnpilot_solids2_trim150_scaffold_50

Search features with annotation key words

Displaying items 61-90 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_50_61
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51527..52000
DNA (474bp) protein (158aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
luxS; LuxS protein; K07173 S-ribosylhomocysteine lyase [EC:4.4.1.21]
S-ribosylhomocysteinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034686DD
scnpilot_solids2_trim150_scaffold_50_62
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(52041..52340)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DAD05
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_50_63
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52415..52801
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPC3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL28538.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_50_64
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52918..53403
DNA (486bp) protein (162aa)
transcription elongation factor GreA n=1 Tax=Microbacterium barkeri RepID=UPI0002D2D517
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
transcription elongation factor; K03624 transcription elongation factor GreA
scnpilot_solids2_trim150_scaffold_50_65
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53467..54696)
DNA (1230bp) protein (410aa)
Threonine dehydratase {ECO:0000313|EMBL:EYT61272.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EYT61272.1};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] rbh
threonine dehydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345BEA2 rbh
scnpilot_solids2_trim150_scaffold_50_66
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54693..55889)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK67_9MICO rbh
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88499.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
permease rbh
scnpilot_solids2_trim150_scaffold_50_67
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56001..57215
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMD6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL28542.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K09927 hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_50_68
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57258..57824)
DNA (567bp) protein (189aa)
membrane protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D86659 rbh
LemA family protein {ECO:0000313|EMBL:KJL18264.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein; K03744 LemA protein rbh
scnpilot_solids2_trim150_scaffold_50_69
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57896..59209)
DNA (1314bp) protein (438aa)
L-gulono-1,4-lactone dehydrogenase {ECO:0000313|EMBL:KJL28545.1}; EC=1.1.2.- {ECO:0000313|EMBL:KJL28545.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FAB6CC rbh
FAD/FMN-containing dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_50_70
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59206..60435)
DNA (1230bp) protein (410aa)
D-threonine aldolase {ECO:0000313|EMBL:KJL18266.1}; EC=4.1.2.42 {ECO:0000313|EMBL:KJL18266.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EB7A71 rbh
alanine racemase domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_50_trna_1
unknown

Not on your lists

60521..60593
DNA (73bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_50_71
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60654..62213)
DNA (1560bp) protein (520aa)
NADH dehydrogenase, type 2; K03885 NADH dehydrogenase [EC:1.6.99.3] rbh
NADH dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJE0_9MICO rbh
NADH dehydrogenase {ECO:0000313|EMBL:EQM78551.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_50_72
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62234..63601)
DNA (1368bp) protein (456aa)
Subtilisin DY {ECO:0000313|EMBL:KJL28550.1}; EC=3.4.21.62 {ECO:0000313|EMBL:KJL28550.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347BFC6 rbh
subtilisin-like serine protease rbh
scnpilot_solids2_trim150_scaffold_50_73
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63598..64131)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK57_9MICO
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88506.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein; K09009 hypothetical protein
scnpilot_solids2_trim150_scaffold_50_74
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64180..64647)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMC7_9MICO
Septum formation initiator {ECO:0000313|EMBL:KJQ53511.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
septum formation initiator
scnpilot_solids2_trim150_scaffold_50_75
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64766..66046)
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
eno; enolase; K01689 enolase [EC:4.2.1.11] rbh
Enolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPA9_9MICO rbh
scnpilot_solids2_trim150_scaffold_50_76
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66275..67255)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D46BE2 rbh
CAAX amino terminal protease self-immunity {ECO:0000313|EMBL:KJL36311.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
metal-dependent membrane protease rbh
scnpilot_solids2_trim150_scaffold_50_77
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67257..68297)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B0D44 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL36310.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_50_78
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68294..68644)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMC3_9MICO
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88511.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_50_79
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

68705..69235
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPA4_9MICO
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_50_80
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(69300..70580)
DNA (1281bp) protein (427aa)
Histidine--tRNA ligase {ECO:0000313|EMBL:KJL21565.1}; EC=6.1.1.21 {ECO:0000313|EMBL:KJL21565.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] rbh
histidyl-tRNA synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CF5BC rbh
scnpilot_solids2_trim150_scaffold_50_81
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70752..71429)
DNA (678bp) protein (226aa)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:KJL21566.1}; EC=3.6.1.8 {ECO:0000313|EMBL:KJL21566.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347AFCB rbh
scnpilot_solids2_trim150_scaffold_50_82
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71440..72603)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F74634 rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ABC-type transporter, permease rbh
scnpilot_solids2_trim150_scaffold_50_83
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

72685..75351
DNA (2667bp) protein (889aa)
ppc; phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] rbh
Phosphoenolpyruvate carboxylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK38_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_50_84
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75494..76861
DNA (1368bp) protein (456aa)
glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000319C2B4 rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_50_85
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76951..77547)
DNA (597bp) protein (199aa)
transferase n=1 Tax=Microbacterium barkeri RepID=UPI0002D2F638 rbh
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88623.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
scnpilot_solids2_trim150_scaffold_50_86
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77876..78913)
DNA (1038bp) protein (346aa)
cytochrome d ubiquinol oxidase subunit II (EC:3.1.3.1); K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-] rbh
cytochrome C oxidase assembly protein n=1 Tax=Ruania albidiflava RepID=UPI0003B726F9 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG65137.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
scnpilot_solids2_trim150_scaffold_50_87
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78935..80509)
DNA (1575bp) protein (525aa)
cytochrome d ubiquinol oxidase subunit I (CydA); K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] rbh
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Ruania albidiflava RepID=UPI0003B6302B rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG65136.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
scnpilot_solids2_trim150_scaffold_50_88
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80638..80994
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MX13_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG65135.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
CopY family transcriptional regulator; K07737 putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_50_89
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80999..81808
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LRL2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG65134.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
hypothetical protein
Displaying items 61-90 of 165 in total

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