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scnpilot_solids2_trim150_scaffold_50

Search features with annotation key words

Displaying items 151-165 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_50_150
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(149679..151094)
DNA (1416bp) protein (472aa)
MFS transporter n=1 Tax=Humibacter albus RepID=UPI0003B30782 rbh
MFS transporter {ECO:0000313|EMBL:KHL00087.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative transporter rbh
scnpilot_solids2_trim150_scaffold_50_151
unknown

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151142..151237
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_50_152
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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151234..152676
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347498A rbh
Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase {ECO:0000313|EMBL:KJL29435.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_50_153
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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152673..153353
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EC25B7 rbh
HTH-type transcriptional regulator McbR {ECO:0000313|EMBL:KJQ56061.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_50_154
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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153353..154867
DNA (1515bp) protein (505aa)
2-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:KJL33186.1}; EC=1.2.1.85 {ECO:0000313|EMBL:KJL33186.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
NAD-dependent aldehyde dehydrogenase; K00151 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] rbh
betaine-aldehyde dehydrogenase n=1 Tax=Agromyces italicus RepID=UPI0003B40816 rbh
scnpilot_solids2_trim150_scaffold_50_155
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

154901..156064
DNA (1164bp) protein (388aa)
bphC; manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase BphC (EC:1.13.11.39) rbh
3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B074C rbh
3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:EYT58339.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids2_trim150_scaffold_50_156
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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156061..156849
DNA (789bp) protein (263aa)
2-hydroxyhexa-2,4-dienoate hydratase {ECO:0000313|EMBL:KJL26268.1}; EC=4.2.1.132 {ECO:0000313|EMBL:KJL26268.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
2-keto-4-pentenoate hydratase; K02509 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] rbh
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CB56C rbh
scnpilot_solids2_trim150_scaffold_50_157
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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156834..157637
DNA (804bp) protein (268aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] rbh
alpha-dehydro-beta-deoxy-D-glucarate aldolase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034827B1 rbh
Alpha-dehydro-beta-deoxy-D-glucarate aldolase {ECO:0000313|EMBL:EYT58337.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids2_trim150_scaffold_50_158
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

157801..159024
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000307352F rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM82320.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
major facilitator superfamily protein rbh
scnpilot_solids2_trim150_scaffold_50_159
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(159052..160416)
DNA (1365bp) protein (455aa)
serine--pyruvate aminotransferase n=1 Tax=Brevibacterium linens RepID=UPI000050F93C rbh
Short chain fatty acid transporter {ECO:0000313|EMBL:KHS53094.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
short chain fatty acid transporter; K02106 short-chain fatty acids transporter rbh
scnpilot_solids2_trim150_scaffold_50_160
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

160513..161241
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030030FB rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL29429.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_50_161
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(161344..162225)
DNA (882bp) protein (294aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] rbh
Bifunctional protein FolD n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFE3_9MICO rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_50_162
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162222..163496)
DNA (1275bp) protein (425aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
glyA; glycine/serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
serine hydroxymethyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034764D9 rbh
scnpilot_solids2_trim150_scaffold_50_163
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

163700..164875
DNA (1176bp) protein (392aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] rbh
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVF7_9MICO rbh
scnpilot_solids2_trim150_scaffold_50_164
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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165321..166799
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTI4_9MICO rbh
hemagglutinin/hemolysin-like protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
Displaying items 151-165 of 165 in total

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