ggKbase home page

scnpilot_solids2_trim150_scaffold_50_103

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(96936..97310)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000375A70B similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 120.0
  • Bit_score: 159
  • Evalue 2.00e-36
Twitching motility protein PilT {ECO:0000313|EMBL:KDA06473.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 98.0
  • Bit_score: 105
  • Evalue 6.40e-20
PIN domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 119.0
  • Bit_score: 92
  • Evalue 1.30e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGCCCGATCTGGTTCTTGATGCTTCCACGGTCGTCGAACTCGTTCGCGGCGAACTCGAGTGGACTCTGGACGGCGATCTCCATGCGCATGCGGGCCTGGATCTCGAGGTGCTCTCCGTGCTGCGTCGGATGGCGCTGCGCGACGAGACCCCACCGCATGTGGCGAGGGAGTCTCTCGACGTCTTCATGGCGCTGATCATCGAGCGCCATCCGGTTCGAGACCTTCTGCCGCGGGTCTGGGCCATGCGGCACGACATCTCCGCCTACGACGCGGGCTATGTCGCGCTGGCGGAAGCACTCGGTGCGCCGCTTGTGACGCACGACAGCAGGCTCGCGAAGACCGCCGAGCGCTATTGCGAGGTCATCGTCCCCTAG
PROTEIN sequence
Length: 125
MPDLVLDASTVVELVRGELEWTLDGDLHAHAGLDLEVLSVLRRMALRDETPPHVARESLDVFMALIIERHPVRDLLPRVWAMRHDISAYDAGYVALAEALGAPLVTHDSRLAKTAERYCEVIVP*