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scnpilot_solids2_trim150_scaffold_1479_2

Organism: SCNPILOT_SOLID2_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(1003..1521)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase, catalytic n=1 Tax=Ralstonia solanacearum SD54 RepID=V5CHJ8_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 196.0
  • Bit_score: 186
  • Evalue 2.20e-44
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EPL59896.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 197.0
  • Bit_score: 174
  • Evalue 1.20e-40
lytic transglycosylase, catalytic; K03194 type IV secretion system protein VirB1 similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 178.0
  • Bit_score: 168
  • Evalue 2.50e-39

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Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGATCGATCTTGCGCTGATCATGGCCTGCGCTCCCAATGTCGCGGCTTCGACCATTCAGGCAATCATAAAGGTCGAAAGTAACGGCAACCCTCTGGCTGTCAACGTGAATAAACGGGGCGGAGCAGGCTATCCCCTTACCAGAAAAATCAAAACGACTGGCGAGGCTGTATCCGCGTCATACGCTGCCATCGCTGCCGGTCATACGGTGGATATGGGATATATGCAGATCAACAGCGTGAACCTGAAGCGCCTGGGATATACCGTGGAAGATATGTTTGACCCTTGCAAGAACATCCAGGCCGGGGCACGGATACTCTCAGAGGCATACAAGCAGGCATTGCCGATCCATGGAAGTGAACAGGCCGCCTTGCGAGCGGCCTTGTCTGCTTACAATACCGGGAATTTCAGGGGGGGATTTGCGAATGGCTACGTGCAGCGGTATGTTCCTGGAGTGTCCAAGCCTTCACTGCGCGAGGCTTACACGTCAGAAGTGAGCGTGCCGTGGGAAGCCAGATAG
PROTEIN sequence
Length: 173
MIDLALIMACAPNVAASTIQAIIKVESNGNPLAVNVNKRGGAGYPLTRKIKTTGEAVSASYAAIAAGHTVDMGYMQINSVNLKRLGYTVEDMFDPCKNIQAGARILSEAYKQALPIHGSEQAALRAALSAYNTGNFRGGFANGYVQRYVPGVSKPSLREAYTSEVSVPWEAR*