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scnpilot_solids2_trim150_scaffold_1479_3

Organism: SCNPILOT_SOLID2_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(1518..2030)

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA processing protein TraF n=1 Tax=uncultured bacterium PF3_9BACT">RepID=U3LPF3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 165.0
  • Bit_score: 178
  • Evalue 4.50e-42
Conjugal transfer protein TraF {ECO:0000313|EMBL:KGK65892.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 165.0
  • Bit_score: 180
  • Evalue 2.10e-42
Type IV secretory pathway protease TraF-like similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 167.0
  • Bit_score: 150
  • Evalue 5.30e-34

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Taxonomy

Xanthomonas axonopodis → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGAGGCGCGCAATCGGGTTTGGCATTATTGCCGGAACGTTCGCAATGCTGATATTCAGGCCGGATACAGGGTTGCGATTGAACCTTACTTCCTCTGCCCCTCGTGGGCTCTGGATGGTGGAACCCGCAAATCACATCAATCGCGGCATCTGGATTTCAGTCTGCCCGCCTGTCTTGCCCGTTACCAGGGCCATGACTGAATACATGCCCTATGGGGATTGTCCGGACCTGGGCGTAGTGCCGCTTCTGAAACCTGTAGGAGCAATTGCAGGGGACAGGGTGAAAATACAGCAAGGCCGGAATATCATGGTCAACGGGCGCGCGCTGCCAAACACCACAGCCAGAAACAACATGCCAACATGGGAAGAGGGCGAATACACCGTCAAGCCCGGGGAGGTATGGCTTTTCTCAAGCTACAGCGCGGGCAGCTTCGACAGCCGGTATTTCGGTCCCGTGAAAATAGACCAGGTGCGCGGCAAGGCCGCACCCCTCTTTACCGAGGATGAGGCATGA
PROTEIN sequence
Length: 171
MRRAIGFGIIAGTFAMLIFRPDTGLRLNLTSSAPRGLWMVEPANHINRGIWISVCPPVLPVTRAMTEYMPYGDCPDLGVVPLLKPVGAIAGDRVKIQQGRNIMVNGRALPNTTARNNMPTWEEGEYTVKPGEVWLFSSYSAGSFDSRYFGPVKIDQVRGKAAPLFTEDEA*