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scnpilot_solids2_trim150_scaffold_660_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_660_curated_1
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1127)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037F75BB
Major facilitator superfamily transporter {ECO:0000313|EMBL:AHH17917.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
putative integral membrane efflux protein
scnpilot_solids2_trim150_scaffold_660_curated_2
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1439..2902)
DNA (1464bp) protein (488aa)
Major facilitator superfamily permease n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C1B8_STRBB
Major facilitator superfamily permease {ECO:0000313|EMBL:AJC56581.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
major facilitator superfamily permease
scnpilot_solids2_trim150_scaffold_660_curated_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2983..3834
DNA (852bp) protein (284aa)
Transcriptional regulator, LysR family n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PWG4_KRIFD
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB31616.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_solids2_trim150_scaffold_660_curated_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3867..4268
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AZH6_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH54247.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids2_trim150_scaffold_660_curated_5
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4687..5343
DNA (657bp) protein (219aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Brevibacterium casei S18 RepID=K9AEN4_9MICO
Activator of Hsp90 ATPase 1-like protein {ECO:0000313|EMBL:AHH21270.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
activator of Hsp90 ATPase 1 family protein
scnpilot_solids2_trim150_scaffold_660_curated_6
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5372..6364)
DNA (993bp) protein (331aa)
Putative RNA polymerase ECF-subfamily sigma factor n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82PJ3_STRAW
sig11; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KEP23753.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
scnpilot_solids2_trim150_scaffold_660_curated_7
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6361..7293)
DNA (933bp) protein (311aa)
dehydrogenase n=1 Tax=Actinoplanes globisporus RepID=UPI000381FBF7
Dehydrogenase {ECO:0000313|EMBL:EDY65090.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
dehydrogenase
scnpilot_solids2_trim150_scaffold_660_curated_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7500..8561
DNA (1062bp) protein (354aa)
Radical SAM domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDW9_NAKMY
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACV79672.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_660_curated_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8543..10366)
DNA (1824bp) protein (608aa)
DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036830C4
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACV79670.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_660_curated_10
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10746..12293
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R5V8_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EET74595.1}; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
subtilisin-like serine protease
scnpilot_solids2_trim150_scaffold_660_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12402..14201
DNA (1800bp) protein (600aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartate--tRNA ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDW0_NAKMY
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACV79663.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_660_curated_12
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14241..15272
DNA (1032bp) protein (344aa)
membrane protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000376E333
Putative membrane protein {ECO:0000313|EMBL:AIJ24277.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_660_curated_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15368..16903
DNA (1536bp) protein (512aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ACV80823.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ACV80823.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Betaine-aldehyde dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6S5_NAKMY
scnpilot_solids2_trim150_scaffold_660_curated_14
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16998..17606
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037D00E5
Acetyltransferase {ECO:0000313|EMBL:EWT01551.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_660_curated_15
unknown

Not on your lists

17603..17911
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_660_curated_16
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18071..18385)
DNA (315bp) protein (105aa)
branched-chain amino acid transporter n=1 Tax=Saccharomonospora halophila RepID=UPI0003798C1D
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EHR60759.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
Branched-chain amino acid transport protein (AzlD)
scnpilot_solids2_trim150_scaffold_660_curated_17
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18382..19122)
DNA (741bp) protein (247aa)
Branched-chain amino acid permease n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XR93_9PSEU
Branched-chain amino acid permease {ECO:0000313|EMBL:EME51650.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
branched-chain amino acid permease
scnpilot_solids2_trim150_scaffold_660_curated_18
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19189..19749
DNA (561bp) protein (187aa)
DNA-binding protein n=1 Tax=Saccharomonospora halophila RepID=UPI00035E288B
Putative transcriptional regulator {ECO:0000313|EMBL:EHR51628.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_660_curated_19
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19902..20393)
DNA (492bp) protein (164aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Phosphoribosyltransferase n=1 Tax=Williamsia sp. D3 RepID=V8CT70_9ACTO
Phosphoribosyltransferase {ECO:0000313|EMBL:ETD30347.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
scnpilot_solids2_trim150_scaffold_660_curated_20
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20504..22060
DNA (1557bp) protein (519aa)
AAA ATPase central domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XD35_NAKMY
ATPase AAA central domain-containing protein; K07478 putative ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:ACV79638.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_660_curated_21
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22153..22713)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QS08_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC70622.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_660_curated_22
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22873..23553
DNA (681bp) protein (227aa)
Helix-turn-helix domain protein n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7MRX9_9MICC
Helix-turn-helix domain protein {ECO:0000313|EMBL:EMQ97695.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_660_curated_23
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23550..24857
DNA (1308bp) protein (436aa)
MFS transporter n=1 Tax=Ruania albidiflava RepID=UPI0003B707BB
Uncharacterized protein {ECO:0000313|EMBL:KGM16297.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Na+/melibiose symporter-like transporter
scnpilot_solids2_trim150_scaffold_660_curated_24
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24878..26068
DNA (1191bp) protein (397aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XF03_NAKMY
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV77889.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_660_curated_25
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26036..27841)
DNA (1806bp) protein (602aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20]
alpha-glucosidase n=1 Tax=Promicromonospora sukumoe RepID=UPI0003688876
Alpha-amylase {ECO:0000313|EMBL:KGM17752.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
scnpilot_solids2_trim150_scaffold_660_curated_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27969..29351)
DNA (1383bp) protein (461aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ACV76640.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ACV76640.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV7_NAKMY
scnpilot_solids2_trim150_scaffold_660_curated_27
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29481..29891
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EWT04966.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
pyridoxamine 5'-phosphate oxidase-like protein
scnpilot_solids2_trim150_scaffold_660_curated_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(29904..30284)
DNA (381bp) protein (127aa)
twitching motility protein PilT n=1 Tax=Actinomyces oris RepID=UPI0002003BBC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
scnpilot_solids2_trim150_scaffold_660_curated_29
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30275..30523)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BPX2_9ZZZZ
Tax=RBG_16_Deltaproteobacteria_71_12_curated
scnpilot_solids2_trim150_scaffold_660_curated_30
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30604..33612)
DNA (3009bp) protein (1003aa)
FAD linked oxidase domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDW9_ANAD2
FAD linked oxidase domain-containing protein; K06911
FAD linked oxidase domain protein {ECO:0000313|EMBL:ACL64214.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
Displaying items 1-30 of 33 in total

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