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scnpilot_solids2_trim150_scaffold_48_curated

Search features with annotation key words

Displaying items 121-150 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_48_curated_121
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119720..120301)
DNA (582bp) protein (194aa)
MarR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000375C7F5
MarR family transcriptional regulator {ECO:0000313|EMBL:ESX78634.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_48_curated_122
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120589..121485
DNA (897bp) protein (299aa)
Branched-chain amino-acid aminotransferase {ECO:0000313|EMBL:CDX15839.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDX15839.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
UPI0003D021B1 related cluster n=1 Tax=unknown RepID=UPI0003D021B1
scnpilot_solids2_trim150_scaffold_48_curated_123
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121637..121927
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPA8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57380.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_124
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121979..122656
DNA (678bp) protein (226aa)
PREDICTED: persulfide dioxygenase ETHE1, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C179FE
Hydrolase {ECO:0000313|EMBL:EHH11200.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Zn-dependent hydrolase, glyoxylase
scnpilot_solids2_trim150_scaffold_48_curated_125
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122755..122967)
DNA (213bp) protein (71aa)
Cold-shock DNA-binding protein family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GE8_MESSB
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABG63527.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_48_curated_126
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123282..123494)
DNA (213bp) protein (71aa)
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D88B
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
'Cold-shock' DNA-binding domain protein {ECO:0000313|EMBL:AID32042.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
scnpilot_solids2_trim150_scaffold_48_curated_127
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123896..124339
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVT4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55159.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_128
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124497..124754
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BD810
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11185.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein
scnpilot_solids2_trim150_scaffold_48_curated_129
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124859..127975
DNA (3117bp) protein (1039aa)
excinuclease ABC subunit B n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EE0078
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B
scnpilot_solids2_trim150_scaffold_48_curated_130
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128000..129460)
DNA (1461bp) protein (487aa)
UPI0003CF574B related cluster n=1 Tax=unknown RepID=UPI0003CF574B
Multidrug transporter MatE {ECO:0000313|EMBL:ESY04832.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
MATE efflux family protein
scnpilot_solids2_trim150_scaffold_48_curated_131
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129662..130093
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F09238
Glyoxalase {ECO:0000313|EMBL:ESY69002.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_132
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130148..130933)
DNA (786bp) protein (262aa)
Cyclohexadienyl dehydratase {ECO:0000313|EMBL:CCD93576.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CCD93576.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
cyclohexadienyl dehydratase (EC:4.2.1.51); K01713 cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
Cyclohexadienyl dehydratase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SH99_9BRAD
scnpilot_solids2_trim150_scaffold_48_curated_133
unknown

Not on your lists

131222..131446
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_48_curated_134
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131519..132313)
DNA (795bp) protein (265aa)
Gamma-glutamyl-gamma-aminobutyrate hydrolase {ECO:0000313|EMBL:EUB98453.1}; EC=3.5.1.94 {ECO:0000313|EMBL:EUB98453.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
gamma-glutamyl hydrolase family protein (EC:3.5.1.-); K07010 putative glutamine amidotransferase
Putative glutamine amidotransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2K3I6_9RHIZ
scnpilot_solids2_trim150_scaffold_48_curated_135
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132552..133772
DNA (1221bp) protein (407aa)
UDP-sulfoquinovose synthase; K06118 UDP-sulfoquinovose synthase [EC:3.13.1.1]
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:ABG63520.1}; EC=3.13.1.1 {ECO:0000313|EMBL:ABG63520.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
UDP-sulfoquinovose synthase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GF5_MESSB
scnpilot_solids2_trim150_scaffold_48_curated_136
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133989..134804
DNA (816bp) protein (272aa)
Glycosyl transferase family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MAV6_9RHIZ
Glycosyl transferase family protein {ECO:0000313|EMBL:EKF18055.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_48_curated_137
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134801..135715
DNA (915bp) protein (305aa)
UDP-glucose 4-epimerase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000372CD80
Sulfolipid biosynthesis protein {ECO:0000313|EMBL:KEC77283.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
NAD-dependent epimerase/dehydratase
scnpilot_solids2_trim150_scaffold_48_curated_138
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135776..137173)
DNA (1398bp) protein (466aa)
UPI0003D051F1 related cluster n=1 Tax=unknown RepID=UPI0003D051F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESZ23414.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
scnpilot_solids2_trim150_scaffold_48_curated_139
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137507..138193
DNA (687bp) protein (229aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
UPI0003CE724C related cluster n=1 Tax=unknown RepID=UPI0003CE724C
5-formyltetrahydrofolate cyclo-ligase
scnpilot_solids2_trim150_scaffold_48_curated_140
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138226..138654
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWZ4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35494.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_141
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138714..139349)
DNA (636bp) protein (212aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
acpD; ACP phosphodiesterase; K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-]
FMN-dependent NADH-azoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J2S7B9_9RHIZ
scnpilot_solids2_trim150_scaffold_48_curated_142
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139489..139893
DNA (405bp) protein (135aa)
HxlR family transcriptional regulator n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000374296A
Putative transcriptional regulator {ECO:0000313|EMBL:EHR03855.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_48_curated_143
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140172..141386)
DNA (1215bp) protein (405aa)
isomerase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003158A29
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EHK57409.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
mandelate racemase/muconate lactonizing protein
scnpilot_solids2_trim150_scaffold_48_curated_144
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141499..142578)
DNA (1080bp) protein (360aa)
Formaldehyde dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MLE6_9RHIZ
Formaldehyde dehydrogenase {ECO:0000313|EMBL:EKF18052.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
formaldehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_48_curated_145
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142758..143150
DNA (393bp) protein (131aa)
thioesterase superfamily protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Acyl-CoA hydrolase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FL75_9RHIZ
Putative hydrolase {ECO:0000313|EMBL:CDX15771.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
scnpilot_solids2_trim150_scaffold_48_curated_146
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143156..144337)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B0686
Extensin-like protein {ECO:0000313|EMBL:EKF18049.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
extensin-like
scnpilot_solids2_trim150_scaffold_48_curated_147
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144636..145466)
DNA (831bp) protein (277aa)
Extensin family protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FM79_9RHIZ
Extensin family protein {ECO:0000313|EMBL:CCV15754.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Extensin family protein
scnpilot_solids2_trim150_scaffold_48_curated_148
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145510..146424)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M793_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF18046.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_149
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146593..147141
DNA (549bp) protein (183aa)
UPI0003CE2FFF related cluster n=1 Tax=unknown RepID=UPI0003CE2FFF
Uncharacterized protein {ECO:0000313|EMBL:CDX43250.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
tetratricopeptide repeat protein
scnpilot_solids2_trim150_scaffold_48_curated_150
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147156..148370)
DNA (1215bp) protein (405aa)
Glucose sorbosone dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 PF2_9RHIZ">RepID=H0HPF2_9RHIZ
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EHK57424.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
soluble aldose sugar dehydrogenase
Displaying items 121-150 of 176 in total

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