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scnpilot_solids2_trim150_scaffold_48_curated

Search features with annotation key words

Displaying items 151-176 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_48_curated_151
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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148553..149032
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 PF3_9RHIZ">RepID=H0HPF3_9RHIZ
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcription elongation factor GreA; K03624 transcription elongation factor GreA
scnpilot_solids2_trim150_scaffold_48_curated_152
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149062..150156
DNA (1095bp) protein (365aa)
group 1 glycosyl transferase; K12989 mannosyltransferase [EC:2.4.1.-]
Glycosyl transferase, group 1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GG6_MESSB
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABG63509.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_48_curated_153
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150153..150899
DNA (747bp) protein (249aa)
Glucosyll transferase family 25 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8M3_9RHIZ
Glucosyll transferase family 25 {ECO:0000313|EMBL:ENN87372.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_48_curated_154
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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150918..151544
DNA (627bp) protein (209aa)
Urease-associated protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X1Y3_9RHIZ
Urease-associated protein {ECO:0000313|EMBL:ERI14804.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_155
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151570..152271
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GG8_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63507.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_48_curated_156
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152977..153189
DNA (213bp) protein (71aa)
glycosyltransferase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225EF7E
Uncharacterized protein {ECO:0000313|EMBL:EPX84616.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_48_curated_157
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153239..154231)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000287DDA2
Uncharacterized protein {ECO:0000313|EMBL:EXL08111.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_158
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(154304..154777)
DNA (474bp) protein (158aa)
Transcriptional regulator, AsnC family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFQ2_MESOW
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEH86857.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_48_curated_159
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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155012..155995
DNA (984bp) protein (328aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWZ2_9RHIZ
scnpilot_solids2_trim150_scaffold_48_curated_160
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156022..156918
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035F6155
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADV11393.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_48_curated_161
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157418..159469)
DNA (2052bp) protein (684aa)
elongation factor G n=1 Tax=Rhizobium loti RepID=UPI000380C561
Small GTP-binding domain protein {ECO:0000313|EMBL:AID31955.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
fusA; elongation factor G; K02355 elongation factor G
scnpilot_solids2_trim150_scaffold_48_curated_162
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159980..160261
DNA (282bp) protein (94aa)
Addiction module antidote protein, HigA family n=1 Tax=Rhizobium sp. CF080 RepID=J2H6K4_9RHIZ
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:CDN55116.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_48_curated_163
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160268..161152)
DNA (885bp) protein (295aa)
Probable O-methyltransferase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98I98_RHILO
O-methyltransferase
Probable O-methyltransferase {ECO:0000313|EMBL:BAB49618.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_48_curated_164
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161256..162044
DNA (789bp) protein (263aa)
Ion transport 2 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNB2_9RHIZ
Ion transport 2 {ECO:0000313|EMBL:EHK57777.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Ion transport 2
scnpilot_solids2_trim150_scaffold_48_curated_165
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(162104..163306)
DNA (1203bp) protein (401aa)
Aspartate aminotransferase {ECO:0000313|EMBL:ESX79300.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ESX79300.1};; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
UPI0003CE8BF0 related cluster n=1 Tax=unknown RepID=UPI0003CE8BF0
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids2_trim150_scaffold_48_curated_166
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163500..164345
DNA (846bp) protein (282aa)
UPI0003CF7D0B related cluster n=1 Tax=unknown RepID=UPI0003CF7D0B
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ESY76844.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
EAL domain-containing protein
scnpilot_solids2_trim150_scaffold_48_curated_167
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164442..165062
DNA (621bp) protein (207aa)
protein gstA; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPG8_9RHIZ
Glutathione S-transferase {ECO:0000313|EMBL:EHK57371.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_48_curated_168
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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165215..166522
DNA (1308bp) protein (436aa)
sn-glycerol-3-phosphate ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EZY6_9RHIZ
sn-glycerol-3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ67571.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
family 1 extracellular solute-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_48_curated_169
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166613..167497
DNA (885bp) protein (295aa)
Permease component of ABC-type sugar transporter n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSG1_9RHIZ
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJN04158.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
maltose-binding periplasmic protein; K05814 sn-glycerol 3-phosphate transport system permease protein
scnpilot_solids2_trim150_scaffold_48_curated_170
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167505..168353
DNA (849bp) protein (283aa)
Glycerol-3-phosphate transporter membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFK2_9RHIZ
Glycerol-3-phosphate transporter membrane protein {ECO:0000313|EMBL:ESX68174.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
binding-protein-dependent transport system inner membrane protein; K05815 sn-glycerol 3-phosphate transport system permease protein
scnpilot_solids2_trim150_scaffold_48_curated_171
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168354..169436
DNA (1083bp) protein (361aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ugpC; glycerol-3-phosphate transporter ATP-binding subunit; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20]
Glycerol-3-phosphate transporter ATP-binding subunit n=1 Tax=Nitratireductor indicus C115 RepID=K2PPH8_9RHIZ
scnpilot_solids2_trim150_scaffold_48_curated_172
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169441..170340)
DNA (900bp) protein (300aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI0002FEFA74
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EWY40452.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
scnpilot_solids2_trim150_scaffold_48_curated_173
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170474..170686)
DNA (213bp) protein (71aa)
Cold-shock DNA-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPG9_9RHIZ
Cold-shock protein {ECO:0000313|EMBL:KKB13441.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
cold-shock protein
scnpilot_solids2_trim150_scaffold_48_curated_174
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170990..171298
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PUX4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM75190.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_175
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171325..171888)
DNA (564bp) protein (188aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000316E490
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:CDX31213.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
scnpilot_solids2_trim150_scaffold_48_curated_176
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172129..172902
DNA (774bp) protein (258aa)
UPI0003CFA907 related cluster n=1 Tax=unknown RepID=UPI0003CFA907
Lytic transglycosylase {ECO:0000313|EMBL:ESZ18814.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
Displaying items 151-176 of 176 in total

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