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scnpilot_solids2_trim150_scaffold_85_curated

Search features with annotation key words

Displaying items 121-150 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_85_curated_121
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137804..138142)
DNA (339bp) protein (113aa)
ArsR family transcription regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQL6_9RHIZ
ArsR family transcription regulator {ECO:0000313|EMBL:EHK56993.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_85_curated_122
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138193..138408)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G6E4_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL76331.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
scnpilot_solids2_trim150_scaffold_85_curated_123
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138424..140139)
DNA (1716bp) protein (572aa)
UPI0003CEF4EF related cluster n=2 Tax=unknown RepID=UPI0003CEF4EF
Peptidoglycan-binding lysin domain-containing protein {ECO:0000313|EMBL:CDX19103.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
peptidoglycan-binding LysM
scnpilot_solids2_trim150_scaffold_85_curated_124

Not on your lists

140252..140854
DNA (603bp) protein (201aa)
TIGR00730 family protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C5B5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN96259.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K06966
scnpilot_solids2_trim150_scaffold_85_curated_125
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140859..141824)
DNA (966bp) protein (322aa)
RarD protein, DMT superfamily transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MSK1_9RHIZ
RarD protein, DMT superfamily transporter {ECO:0000313|EMBL:EKF20362.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
transporter DMT superfamily protein; K05786 chloramphenicol-sensitive protein RarD
scnpilot_solids2_trim150_scaffold_85_curated_126
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141888..143510)
DNA (1623bp) protein (541aa)
2-isopropylmalate synthase/homocitrate synthase family protein; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y788_MESOW
2-isopropylmalate synthase {ECO:0000313|EMBL:ESX51859.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
scnpilot_solids2_trim150_scaffold_85_curated_127
unknown

Not on your lists

comp(143507..143626)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_85_curated_128
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143619..144584)
DNA (966bp) protein (322aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CF05ED related cluster n=1 Tax=unknown RepID=UPI0003CF05ED
proline iminopeptidase
scnpilot_solids2_trim150_scaffold_85_curated_129
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144601..144984)
DNA (384bp) protein (128aa)
glyoxalase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F1FA67
Glyoxalase {ECO:0000313|EMBL:EXL03926.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_solids2_trim150_scaffold_85_curated_130
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144981..145376)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FKC1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV12689.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_85_curated_131
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145588..147021)
DNA (1434bp) protein (478aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteinyl-tRNA synthetase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GDI2_9RHIZ
scnpilot_solids2_trim150_scaffold_85_curated_132
unknown

Not on your lists

147113..147430
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_85_curated_133
unknown

Not on your lists

147378..147542
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_85_curated_134
unknown

Not on your lists

comp(147617..147946)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_85_curated_135
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147989..148738)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003642534
Uncharacterized protein {ECO:0000313|EMBL:ESZ24204.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_85_curated_136
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148836..149240
DNA (405bp) protein (135aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JR5_MESSB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABG62360.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_85_curated_137
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149291..149665
DNA (375bp) protein (125aa)
UPI0003CFF6ED related cluster n=1 Tax=unknown RepID=UPI0003CFF6ED
Uncharacterized protein {ECO:0000313|EMBL:CDX41482.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_85_curated_138
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149798..150055
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003743A2C
Uncharacterized protein {ECO:0000313|EMBL:EXL03931.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_85_curated_139
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150164..150949
DNA (786bp) protein (262aa)
Fibronectin-attachment protein (FAP) n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KPZ0_MESAW
Fibronectin-attachment protein (FAP)
Fibronectin-attachment protein (FAP) {ECO:0000313|EMBL:AGB47181.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_85_curated_140
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151003..151836
DNA (834bp) protein (278aa)
Possible 3',5'-cyclic-nucleotide phosphodiesterase, cpdA n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DF72_9RHIZ
Putative phosphohydrolase {ECO:0000313|EMBL:EDQ31904.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
3',5'-cyclic-nucleotide phosphodiesterase
scnpilot_solids2_trim150_scaffold_85_curated_141
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151972..152259
DNA (288bp) protein (96aa)
Acyl carrier protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VUR4_9RHIZ
Phosphopantetheine-binding protein {ECO:0000313|EMBL:KFB09809.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
Phosphopantetheine-binding domain protein
scnpilot_solids2_trim150_scaffold_85_curated_142
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152293..153471
DNA (1179bp) protein (393aa)
3-oxoacyl-(Acyl carrier protein) synthase II {ECO:0000313|EMBL:EHK56170.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EHK56170.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-(Acyl carrier protein) synthase II n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSU4_9RHIZ
scnpilot_solids2_trim150_scaffold_85_curated_143
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153482..154753
DNA (1272bp) protein (424aa)
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:ESX74151.1}; EC=2.3.1.41 {ECO:0000313|EMBL:ESX74151.1};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
3-oxoacyl-ACP synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIW2_9RHIZ
3-oxoacyl-(acyl-carrier-protein) synthase
scnpilot_solids2_trim150_scaffold_85_curated_144
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154784..155812
DNA (1029bp) protein (343aa)
zinc-binding alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
PREDICTED: synaptic vesicle membrane protein VAT-1 homolog n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17885
Zinc-binding alcohol dehydrogenase {ECO:0000313|EMBL:KFB09806.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
scnpilot_solids2_trim150_scaffold_85_curated_145
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155812..156783
DNA (972bp) protein (324aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCV0_9RHIZ
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:EHH10422.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids2_trim150_scaffold_85_curated_146
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156761..157681)
DNA (921bp) protein (307aa)
DMSO reductase anchor subunit (DmsC) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSU9_9RHIZ
DMSO reductase anchor subunit (DmsC) {ECO:0000313|EMBL:EHK56175.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
DMSO reductase chain C
scnpilot_solids2_trim150_scaffold_85_curated_147
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157685..158452)
DNA (768bp) protein (256aa)
Iron-sulfur cluster-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSV0_9RHIZ
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EHK56176.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
dmsB; 4Fe-4S ferredoxin
scnpilot_solids2_trim150_scaffold_85_curated_148
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158449..161298)
DNA (2850bp) protein (950aa)
molybdopterin-binding oxidoreductase; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-]
formate dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F116D7
Oxidoreductase, molybdopterin-binding protein {ECO:0000313|EMBL:EHK56177.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_85_curated_149
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161397..161828)
DNA (432bp) protein (144aa)
Uncharacterized protein n=6 Tax=Mesorhizobium RepID=V7F5G1_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CDX44497.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_85_curated_150
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162025..163305
DNA (1281bp) protein (427aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
succinyl-diaminopimelate desuccinylase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DEF1AA
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EHK56179.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Displaying items 121-150 of 191 in total

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