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scnpilot_solids2_trim150_scaffold_85_curated

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Displaying items 181-191 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_85_curated_181
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(187487..187687)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MCA1_9RHIZ
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
scnpilot_solids2_trim150_scaffold_85_curated_182
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(187701..188114)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036124DA
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
scnpilot_solids2_trim150_scaffold_85_curated_183
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(188145..188852)
DNA (708bp) protein (236aa)
30S ribosomal protein S3 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FP36_9RHIZ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ribosomal protein S3, bacterial type
scnpilot_solids2_trim150_scaffold_85_curated_184
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(188852..189241)
DNA (390bp) protein (130aa)
50S ribosomal protein L22 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N2E7_9RHIZ
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ribosomal protein L22, bacterial type
scnpilot_solids2_trim150_scaffold_85_curated_185
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(189244..189522)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C2BBB
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ribosomal protein S19, bacterial/organelle
scnpilot_solids2_trim150_scaffold_85_curated_186
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(189538..190371)
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MCB3_9RHIZ
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
scnpilot_solids2_trim150_scaffold_85_curated_187
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(190391..190684)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FB46_9RHIZ
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
50S ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23
scnpilot_solids2_trim150_scaffold_85_curated_188
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(190681..191304)
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDU0_MESOW
50S ribosomal protein L4/L1e; K02926 large subunit ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
scnpilot_solids2_trim150_scaffold_85_curated_189
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(191301..192023)
DNA (723bp) protein (241aa)
50S ribosomal protein L3 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RL3_MESSB
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_85_curated_190
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(192120..192428)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G7H6_9RHIZ
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
scnpilot_solids2_trim150_scaffold_85_curated_191
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(192494..193660)
DNA (1167bp) protein (389aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Elongation factor Tu n=11 Tax=Rhizobiaceae RepID=EFTU_RHIME
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
Displaying items 181-191 of 191 in total

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