ggKbase home page

scnpilot_solids2_trim150_scaffold_112_curated_216

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 236182..236952

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHF5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 250.0
  • Bit_score: 362
  • Evalue 4.30e-97
ABC-type nitrate/sulfonate/bicarbonate transport system permease component {ECO:0000313|EMBL:EYR78609.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 250.0
  • Bit_score: 362
  • Evalue 6.00e-97
Binding-protein-dependent transport systems inner membrane component; K15554 sulfonate transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 257.0
  • Bit_score: 179
  • Evalue 1.20e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGACGAGGGGCGAACGCGCAGCCGATATCGGATGGGGGTTGGCCGGTATTGCGCTTGTGCTGGGGCTATGGGAACTCGCCACGCGCGCCGGGGCCATCGACCCCAGCATCTTCCCCGGGCCGATCACGGCAGTGCGCATGGCAGCCGGGCGGCTGCCCGCAAGCGTCTTTCTCGACAATATGGGATGGAGCCTGTTCCGGGTGACGGTCGGATTCGCTCTAGGGGCGGTAACCGGCACGATCGTCGGATTCGCCGCCGGCTGGTACCGTGGCTTCGGCTACGTCGCGCGACCGCTCATAGAACTACTGCGGCCGATCCCACCTCTGGCCTGGATCCCGCTTGCCATCATCTGGTTCGGTCTGGGCGAGCCTTCGAAGCTCTTCATGGTCTTCCTGGGTGCGTTCTTCCCGGTCGTGACGGCTGCCTATCATGGCATCACCCATATCGATCCGGCGCTCATCCGTGCCTCCCGCAGCTTCGGGCTCAAGGGCGTCGCCATGTTGTTCCATGTAGGCATCCCCGCTTCGGCGCCCGATCTGGCGACGGGGATCCGTGTCGGATGGGGACTGAGCTTCGGTGTGCTCGTTGCCGCGGAACTGATCGCCGCGGACCGCGGCCTCGGCTTCATGATCATGAACGAAAGAAACAGCGGCGGGTCGGTCAGCGTGATCATCGTCGGCATTCTGCTGATCGGCCTTCTGAATCTCGTATCCGACGCCGCGATCGCGGCATTCATTCAACGCCGGATCGGACGCTGGCATGGCGCCTGA
PROTEIN sequence
Length: 257
MTRGERAADIGWGLAGIALVLGLWELATRAGAIDPSIFPGPITAVRMAAGRLPASVFLDNMGWSLFRVTVGFALGAVTGTIVGFAAGWYRGFGYVARPLIELLRPIPPLAWIPLAIIWFGLGEPSKLFMVFLGAFFPVVTAAYHGITHIDPALIRASRSFGLKGVAMLFHVGIPASAPDLATGIRVGWGLSFGVLVAAELIAADRGLGFMIMNERNSGGSVSVIIVGILLIGLLNLVSDAAIAAFIQRRIGRWHGA*