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scnpilot_solids2_trim150_scaffold_112_curated_217

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 237001..238056

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EYR78610.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 341.0
  • Bit_score: 481
  • Evalue 9.30e-133
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein id=3348585 bin=GWF2_Methylomirabilis_70_14 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 25.4
  • Coverage: 338.0
  • Bit_score: 104
  • Evalue 2.90e-19
taurine ABC transporter substrate binding protein; K15551 taurine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 27.2
  • Coverage: 353.0
  • Bit_score: 92
  • Evalue 2.70e-16

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGACTGGAAACCTGATTCGCAGACATTTTATCGGACTGGCCGCCGCAGCCATTGCGTCCGCGCTGGTCGGCGCGCCGGCCAGTGCGGCCGACACGCCTGAAACCGACACGCTGACGATCAGCATCGGACCGGATCTGCCCTTCCTCGTCCATATCGTCGCGAAGGAGAAGGGTTGGTTCGCCGATGCCGGATTCAAGAATGTCGAGTTCAAGCAGTTCACCTCCGGCAACCTCGCCGGCGAAGCATTGCTCGCCGACCAGATCCAGCTTTGGACGCCCGGCAACCTGCCGCCTGTGGCGATGGTGCACAACGGCATTCCCGTGGTCGTCCTCGGCTCCAATGCCGTCAGCCACGGCCTTGAAAAGCTTGTCGTGCGCAAGGATGCCAGGATCGAGAAGCCCGAGGATCTCTACAAGGCCAAGATCGGCCTGCTGCTCAGTTCGACCTCGGGCGCGATGTTGGGAAACCTGGCGCGGAAATACAATCTCGATCCCTCCAAGCTCCAGGGCGTCAATTTGGCGCCGCCGGAAGGTCTCGCCGCGCTCAAGAGCAATGAGGTCCAGGGCATCATTTACTGGGAGCCCTTCCCCTATCAGGCCCTGCAAAGCCCGGATATGGAGTTGCTCCACACCGGCACGAAGAGCTACTTCCCGCAAAACAAGGGCGAGGATGTTCAGGTCTCGAACAACCGGACCGTCTGGGTCGCCTCGCAGGACTGGGTGAAGAAGAACCCGGTCGCGACGAAGGCTCTGTTGGGCGTGCTCCTCAAGGCGCAGGCCTGGGTCAGCGATCCCGCGCACCAGGACGAGGCGCTGAAGATATTCTCCGACTACCAGAAACAGCCCGTCGAGATGAACAAGGCCCTGATCGGCAACTATGTGTTCGATCCGAAATTCGACCAGGCCTATGTCGACGACATGAAGGCGATGGAATCGTACCTGAAGAGCACGAACCGTATTCCGAGCGAGGGCGACCCTCTCGACTATAGCTACTCCGGTCCCATGAAATCGATCGATGCGTCGCTTGTGGCGATCGACGGCAAGTGGAAACCCTGA
PROTEIN sequence
Length: 352
MTGNLIRRHFIGLAAAAIASALVGAPASAADTPETDTLTISIGPDLPFLVHIVAKEKGWFADAGFKNVEFKQFTSGNLAGEALLADQIQLWTPGNLPPVAMVHNGIPVVVLGSNAVSHGLEKLVVRKDARIEKPEDLYKAKIGLLLSSTSGAMLGNLARKYNLDPSKLQGVNLAPPEGLAALKSNEVQGIIYWEPFPYQALQSPDMELLHTGTKSYFPQNKGEDVQVSNNRTVWVASQDWVKKNPVATKALLGVLLKAQAWVSDPAHQDEALKIFSDYQKQPVEMNKALIGNYVFDPKFDQAYVDDMKAMESYLKSTNRIPSEGDPLDYSYSGPMKSIDASLVAIDGKWKP*