ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_134_curated_52

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(47242..47757)

Top 3 Functional Annotations

Value Algorithm Source
Phenylacetic acid degradation protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D480_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 173.0
  • Bit_score: 210
  • Evalue 1.40e-51
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:KEJ93901.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 158.0
  • Bit_score: 228
  • Evalue 9.00e-57
phenylacetic acid degradation protein; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 173.0
  • Bit_score: 210
  • Evalue 4.40e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfitobacter pseudonitzschiae → Sulfitobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGTGACCGCAATCCAAAGCAAGTTGACATCGCCATCGCTGGAAGTGGCGCGCAAGGCGCTCGATGAGGTGGTCGATCCGGAAATTCCGGTTCTCACGATTGCCGATATCGGGATCCTCCGGGATGTCCGGCTGACGTCCGAAGGGGAACTGGAAGTCGTCATCACGCCGACCTATTCTGGATGTCCGGCGATGAATGTGATCGCCTTCGAAATCGAGGTGGCGCTGGCGCGCGCCGGCATCGATACGTTTAGGCTGACCAATCAGCTTTCGCCGGCTTGGACGACCGACTGGCTGACCGACGTGGCGCGCGAGAAAATGCGTGCTTACGGCATCGCTCCACCCGTGGAAGCCTCGACCTCGAAACGGACGCTGTTCGCAGCGGATGCGGCCCGGTGTCCCAGATGCGGCAGCGAGCGGACGGAACGCGTGAGCGAATTCGGATCGAGCGCCTGCAAGGCGCAATACCGGTGCGAAGCCTGCAAGGAACCGTTCGACTATTTCAAATGCATATGA
PROTEIN sequence
Length: 172
MVTAIQSKLTSPSLEVARKALDEVVDPEIPVLTIADIGILRDVRLTSEGELEVVITPTYSGCPAMNVIAFEIEVALARAGIDTFRLTNQLSPAWTTDWLTDVAREKMRAYGIAPPVEASTSKRTLFAADAARCPRCGSERTERVSEFGSSACKAQYRCEACKEPFDYFKCI*