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scnpilot_solids2_trim150_scaffold_667_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_667_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(133..879)
DNA (747bp) protein (249aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Nia
Octanoyltransferase; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJR0_9SPHI
scnpilot_solids2_trim150_scaffold_667_curated_2
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(895..1452)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2N7_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:KEQ30924.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_667_curated_3
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1484..2701)
DNA (1218bp) protein (406aa)
RND family efflux transporter MFP subunit n=2 Tax=Flavobacterium RepID=J1AIS4_9FLAO
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EJG02169.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
scnpilot_solids2_trim150_scaffold_667_curated_4
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2698..4029)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=2 Tax=Flavobacterium RepID=J0S287_9FLAO
hypothetical protein
Hypothetical lipoprotein {ECO:0000313|EMBL:ABQ06088.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_solids2_trim150_scaffold_667_curated_5
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4007..5293)
DNA (1287bp) protein (429aa)
Outer membrane protein-like protein n=2 Tax=Flavobacterium RepID=A5FFD1_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:EJG02171.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_667_curated_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5244..7178)
DNA (1935bp) protein (645aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2P1_PEDHD
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACU05251.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_667_curated_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7175..8473)
DNA (1299bp) protein (433aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2P2_PEDHD
CzcA family heavy metal efflux pump
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACU05252.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_667_curated_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8626..9024)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C322_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:GAO45468.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_667_curated_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9193..10251)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVC7_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42759.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_667_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10665..11732
DNA (1068bp) protein (356aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB35_CHIPD
scnpilot_solids2_trim150_scaffold_667_curated_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11793..12173)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003667690
Uncharacterized protein {ECO:0000313|EMBL:GAO44149.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
sulfate transporter/antisigma-factor antagonist STAS
scnpilot_solids2_trim150_scaffold_667_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12408..14939
DNA (2532bp) protein (844aa)
ATPase AAA-2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNQ5_NIAKG
ATPase AAA-2 domain protein {ECO:0000313|EMBL:AEW00981.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
scnpilot_solids2_trim150_scaffold_667_curated_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15062..15736
DNA (675bp) protein (225aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000256|SAAS:SAAS00098295};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
cytidylate kinase n=1 Tax=Niabella aurantiaca RepID=UPI0003816C31
scnpilot_solids2_trim150_scaffold_667_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15749..16825
DNA (1077bp) protein (359aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPX7_NIAKG
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEV99971.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_667_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17011..18018)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99974.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_667_curated_16
unknown

Not on your lists

18056..18526
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_667_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18612..19385
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99976.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_667_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19412..20521
DNA (1110bp) protein (370aa)
Cellulase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRM5_9SPHI
Peptidase M42 {ECO:0000313|EMBL:AHF15493.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cellulase
scnpilot_solids2_trim150_scaffold_667_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20540..20710
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000360DE6F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99979.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_667_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20703..22073
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99980.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_667_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22080..23579
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98519.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_667_curated_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23593..25197
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6PAQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIC93468.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_667_curated_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25245..26231)
DNA (987bp) protein (329aa)
PhoH family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N6_NIAKG
Phosphate starvation protein PhoH {ECO:0000313|EMBL:KIC91620.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
scnpilot_solids2_trim150_scaffold_667_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26349..28856)
DNA (2508bp) protein (836aa)
TonB-dependent receptor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPE2_NIAKG
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEV96748.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 24 items

View Taxonomy