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scnpilot_solids2_trim150_scaffold_233_curated

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_233_curated_1
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40..249)
DNA (210bp) protein (70aa)
outer membrane protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF26
Uncharacterized protein {ECO:0000313|EMBL:AIK95595.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
outer membrane factor; K12340 outer membrane channel protein
scnpilot_solids2_trim150_scaffold_233_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1042..2193)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ49_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01050.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_233_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2704..3198)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BUI5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC90810.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
nuclease (snase domain-containing protein)
scnpilot_solids2_trim150_scaffold_233_curated_4
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3198..4106)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KNI2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEN47073.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_233_curated_5
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4111..5400)
DNA (1290bp) protein (430aa)
Membrane protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BL55_ZUNPS
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_233_curated_6
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5402..5803)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI000287C677
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53399.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_233_curated_7
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5940..6302)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZ41_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31424.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_233_curated_8
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6351..7454)
DNA (1104bp) protein (368aa)
Putative uncharacterized protein id=4382919 bin=GWF2_Bacteroidetes_43_11 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein; K07504 hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids2_trim150_scaffold_233_curated_9
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7981..9042)
DNA (1062bp) protein (354aa)
copper-transporting ATPase, P-type (copB); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-exporting P-type ATPase B n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NNP9_9BACT
ATPase {ECO:0000313|EMBL:KJS04398.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
scnpilot_solids2_trim150_scaffold_233_curated_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9189..9980)
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVL5_LEAB4
Oxidoreductase {ECO:0000313|EMBL:KIC91261.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
short-chain dehydrogenase/reductase sdr
scnpilot_solids2_trim150_scaffold_233_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10641..11102
DNA (462bp) protein (154aa)
Transposase IS200-family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NU32_9SPHI
Transposase {ECO:0000313|EMBL:AHF16876.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
transposase IS200/IS605 family
scnpilot_solids2_trim150_scaffold_233_curated_12
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11257..11664)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S579_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52024.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_233_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11738..13165)
DNA (1428bp) protein (476aa)
Glutamine--scyllo-inositol transaminase n=1 Tax=Niabella soli DSM 19437 RepID=H1NMB9_9SPHI
Aminotransferase DegT {ECO:0000313|EMBL:AHF14514.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DegT/DnrJ/EryC1/StrS aminotransferase
scnpilot_solids2_trim150_scaffold_233_curated_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13167..16043)
DNA (2877bp) protein (959aa)
Membrane-bound dehydrogenase domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KU62_HALH1
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:AEE50159.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
membrane-bound dehydrogenase domain-containing protein
scnpilot_solids2_trim150_scaffold_233_curated_15
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16040..16912)
DNA (873bp) protein (291aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KU63_HALH1
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEE50160.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_233_curated_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16982..18259
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFX0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ20129.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_233_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18290..19150
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK99_NIAKG
hypothetical protein; K09933 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96533.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_233_curated_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(19367..19828)
DNA (462bp) protein (154aa)
transposase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002EB0CF0
tpn; transposase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_233_curated_19
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20194..20946)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLJ4_9BACT
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_233_curated_20
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20913..22355)
DNA (1443bp) protein (481aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1)
Putative cytochrome c oxidase, subunit I n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLJ8_9BACT
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_233_curated_21
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22368..22919)
DNA (552bp) protein (184aa)
cytochrome c oxidase, subunit II (EC:1.9.3.1)
Putative cytochrome c oxidase, subunit II n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLJ9_9BACT
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_233_curated_22
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23658..25148)
DNA (1491bp) protein (497aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Flavobacterium sp. CF136 RepID=J2S8H3_9FLAO
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EJL61567.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_233_curated_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25192..26409)
DNA (1218bp) protein (406aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
diaminopimelate decarboxylase n=1 Tax=Segetibacter koreensis RepID=UPI0003810F90
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_233_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26527..27405)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F832C
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AEV99360.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_233_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28034..28651)
DNA (618bp) protein (206aa)
WbqC-like family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ32_NIAKG
WbqC-like family protein
WbqC-like family protein {ECO:0000313|EMBL:AEV97549.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_233_curated_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28946..29404
DNA (459bp) protein (153aa)
Water Stress and Hypersensitive response domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ31_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93625.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Water Stress and Hypersensitive response domain-containing protein
scnpilot_solids2_trim150_scaffold_233_curated_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30124..30345)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42954.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_233_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30508..32772
DNA (2265bp) protein (755aa)
Aconitase {ECO:0000313|EMBL:AEW00740.1}; EC=4.2.1.3 {ECO:0000313|EMBL:AEW00740.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
aconitase; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ3_NIAKG
scnpilot_solids2_trim150_scaffold_233_curated_29
unknown

Not on your lists

32937..33314
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_233_curated_30
unknown

Not on your lists

comp(33248..33373)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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