ggKbase home page

scnpilot_solids2_trim150_scaffold_1514_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1514_curated_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

684..3161
DNA (2478bp) protein (826aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBT7_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51833.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_1514_curated_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3236..4675
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBT6_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51832.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_1514_curated_3
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5260..5613)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CEA6A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF54395.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids2_trim150_scaffold_1514_curated_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6270..9299
DNA (3030bp) protein (1010aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ26_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ24611.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor plug
scnpilot_solids2_trim150_scaffold_1514_curated_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9313..10818
DNA (1506bp) protein (502aa)
RagB/SusD domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ27_9SPHI
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EHQ24612.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RagB/SusD domain-containing protein
scnpilot_solids2_trim150_scaffold_1514_curated_6
unknown

Not on your lists

comp(10914..11180)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1514_curated_7
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11247..11705)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVN8_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07460.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1514_curated_8
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12008..12586
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEI9_SPHS2
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ76684.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_1514_curated_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12607..13998
DNA (1392bp) protein (464aa)
FecR protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEJ0_SPHS2
FecR protein
FecR protein {ECO:0000313|EMBL:ADZ76685.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_1514_curated_10
unknown

Not on your lists

14301..14516
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1514_curated_11
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14519..14863
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SGM3_DICD3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADM97672.1}; TaxID=198628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).;"
scnpilot_solids2_trim150_scaffold_1514_curated_12
unknown

Not on your lists

14976..15110
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1514_curated_13
unknown

Not on your lists

comp(15063..15155)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 13 items

View Taxonomy