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scnpilot_solids2_trim150_scaffold_255_curated

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_255_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

159..947
DNA (789bp) protein (263aa)
multifunctional protein surE; K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
5'-nucleotidase SurE n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDR2_NIAKG
scnpilot_solids2_trim150_scaffold_255_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

944..1243
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDR3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01513.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_255_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1367..2470
DNA (1104bp) protein (368aa)
lipid-A-disaccharide synthase; K00748 lipid-A-disaccharide synthase [EC:2.4.1.182]
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:AEW01514.1}; EC=2.4.1.182 {ECO:0000313|EMBL:AEW01514.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036ED50F
scnpilot_solids2_trim150_scaffold_255_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3146..4153
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF92_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97302.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_255_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4181..5680)
DNA (1500bp) protein (500aa)
Tagaturonate reductase; K00041 tagaturonate reductase [EC:1.1.1.58]
Tagaturonate reductase {ECO:0000313|EMBL:AEW01534.1}; EC=1.1.1.58 {ECO:0000313|EMBL:AEW01534.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Tagaturonate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDT4_NIAKG
scnpilot_solids2_trim150_scaffold_255_curated_6
unknown

Not on your lists

comp(5741..5887)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_255_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5911..7152)
DNA (1242bp) protein (414aa)
glutamate-5-semialdehyde dehydrogenase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella k
Gamma-glutamyl phosphate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCQ9_NIAKG
scnpilot_solids2_trim150_scaffold_255_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7162..8196)
DNA (1035bp) protein (345aa)
glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11]
Glutamate 5-kinase {ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|SAAS:SAAS00186442};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
glutamate 5-kinase n=1 Tax=Segetibacter koreensis RepID=UPI000372A782
scnpilot_solids2_trim150_scaffold_255_curated_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8413..10761)
DNA (2349bp) protein (783aa)
nitric-oxide reductase subunit B; K04561 nitric oxide reductase subunit B [EC:1.7.2.5]
Nitric-oxide reductase {ECO:0000313|EMBL:KIC92098.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
nitric-oxide reductase id=3235756 bin=GWF2_Bacteroidetes_41_9 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
scnpilot_solids2_trim150_scaffold_255_curated_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

11039..11761
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000377AEC0
cAMP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_255_curated_11
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

11896..12081
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXB7_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP74738.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_12
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

12105..13025
DNA (921bp) protein (307aa)
cyoA; heme/copper-type cytochrome/quinol oxidase subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL9_HYDTT
Heme/copper-type cytochrome/quinol oxidase subunit 2 {ECO:0000313|EMBL:BAI68621.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_255_curated_13
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

13043..14710
DNA (1668bp) protein (556aa)
cyoB; heme/copper-type cytochrome/quinol oxidase subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase subunit I n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL8_HYDTT
Heme/copper-type cytochrome/quinol oxidase subunit 1 {ECO:0000313|EMBL:BAI68620.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_255_curated_14
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

14730..15527
DNA (798bp) protein (266aa)
Electron transport protein SCO1/SenC n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL6_HYDTT
electron transport protein SCO1/SenC
SCO1/SenC/PrrC family protein {ECO:0000313|EMBL:BAI68618.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_255_curated_15
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

15524..17470
DNA (1947bp) protein (649aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFM1_HYDTT
4Fe-4S ferredoxin
Cytochrome b/b6 {ECO:0000313|EMBL:BAI68623.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_255_curated_16
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17690..19327)
DNA (1638bp) protein (546aa)
Resolvase, N-terminal domain protein (Fragment) n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUQ8_9SPHI
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEI93391.1}; Flags: Fragment;; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
site-specific recombinase, DNA invertase Pin
scnpilot_solids2_trim150_scaffold_255_curated_17
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19311..19469)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FW17_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI92797.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
scnpilot_solids2_trim150_scaffold_255_curated_18
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19542..19832)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVT0_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07411.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_19
unknown

Not on your lists

comp(19841..20581)
DNA (741bp) protein (247aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_255_curated_20
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20676..21884)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003664053
Uncharacterized protein {ECO:0000313|EMBL:KDN54664.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_21
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21912..22760)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003714741
Conjugative transposon protein TraN {ECO:0000313|EMBL:KGO80815.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_22
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22804..24117)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003739FDC
Conjugal transfer protein TraM {ECO:0000313|EMBL:KFF13741.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_23
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24126..24620)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT2_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53780.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids2_trim150_scaffold_255_curated_24
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24624..25241)
DNA (618bp) protein (206aa)
Conjugative transposon protein TraK n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVJ3_9FLAO
Conjugal transfer protein {ECO:0000313|EMBL:KIA95591.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_25
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25292..26506)
DNA (1215bp) protein (405aa)
TraJ family protein conjugative transposon n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT0_ZUNPS
Conjugal transfer protein TraJ {ECO:0000313|EMBL:KGO80811.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
TraJ family protein conjugative transposon
scnpilot_solids2_trim150_scaffold_255_curated_26
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26518..27150)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00037D3777
Uncharacterized protein {ECO:0000313|EMBL:KGO80810.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_27
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27156..27800)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS8_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KGO80809.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_28
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27811..28488)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003682027
Conjugal transfer protein TraI {ECO:0000313|EMBL:KGO80808.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_255_curated_29
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28510..30978)
DNA (2469bp) protein (823aa)
conjugate transposon protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002EF6C79
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54471.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
Type IV secretory pathway VirB4 components-like protein
scnpilot_solids2_trim150_scaffold_255_curated_30
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31011..31829)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZY0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AIM38393.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
Displaying items 1-30 of 56 in total

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