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SCNpilot_solid_1_scaffold_111

Search features with annotation key words

Displaying items 31-60 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_111_30
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

33544..34830
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000380A2B2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL17229.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerul
SCNpilot_solid_1_scaffold_111_31
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

34823..36373
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003798AE0
putative anti-sigma regulatory factor Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
putative anti-sigma regulatory factor
SCNpilot_solid_1_scaffold_111_32
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36408..37313)
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MI47_ACIET
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACM32979.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
SCNpilot_solid_1_scaffold_111_33
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37474..38067
DNA (594bp) protein (198aa)
Trp repressor binding protein WrbA, putative n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F5M3E6_RHOSH
Trp repressor binding protein WrbA, putative {ECO:0000313|EMBL:EKX56958.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" sour
wrbA; trp repressor binding protein WrbA, putative
SCNpilot_solid_1_scaffold_111_34
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38101..39495)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000313C438
MFS transporter {ECO:0000313|EMBL:EZQ15004.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Drug resistance transporter EmrB/QacA subfamily
SCNpilot_solid_1_scaffold_111_35
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39791..40240
DNA (450bp) protein (150aa)
Diamine acetyltransferase n=1 Tax=Galbibacter marinus RepID=K2QH63_9FLAO
Putative acetyltransferase {ECO:0000313|EMBL:GAO45481.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
GCN5-related N-acetyltransferase
SCNpilot_solid_1_scaffold_111_36
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40302..41147
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKX8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82463.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 /
SCNpilot_solid_1_scaffold_111_37
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41207..41818
DNA (612bp) protein (204aa)
Tellurite resistance protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPC3_9BURK
Tellurite resistance protein {ECO:0000313|EMBL:EIK91063.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
hypothetical protein
SCNpilot_solid_1_scaffold_111_38
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42025..42615
DNA (591bp) protein (197aa)
nlp/p60 protein id=12552127 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nlp/p60 protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
nlp/p60 protein
SCNpilot_solid_1_scaffold_111_39
Neisseria flavescens, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42682..43065)
DNA (384bp) protein (128aa)
DoxX family protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0EQA3_NEIFL
DoxX family protein {ECO:0000313|EMBL:EEG32858.1}; TaxID=546264 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria flavescens NRL30031/H
hypothetical protein
SCNpilot_solid_1_scaffold_111_40
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43139..44020)
DNA (882bp) protein (294aa)
tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Alicycliphilus denitrificans RepID=E8TT83_ALIDB rbh
tRNA/rRNA methyltransferase (spou)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AEB85785.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
SCNpilot_solid_1_scaffold_111_41
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44017..44640)
DNA (624bp) protein (208aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
ribonuclease h (EC:3.1.26.4)
UPI0003D3C8FD related cluster n=1 Tax=unknown RepID=UPI0003D3C8FD
SCNpilot_solid_1_scaffold_111_42
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44615..45733)
DNA (1119bp) protein (373aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1603291 species="B
Lipid-A-disaccharide synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT81_ALIDB rbh
SCNpilot_solid_1_scaffold_111_43
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45772..46560)
DNA (789bp) protein (263aa)
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F7E96 rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
SCNpilot_solid_1_scaffold_111_44
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46574..47017)
DNA (444bp) protein (148aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] id=12551533 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
fabZ; 3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-)
SCNpilot_solid_1_scaffold_111_45
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47014..48015)
DNA (1002bp) protein (334aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
UDP-3-O-acylglucosamine N-acyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT78_ALIDB rbh
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
SCNpilot_solid_1_scaffold_111_46
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48040..48573)
DNA (534bp) protein (178aa)
Outer membrane chaperone Skp (OmpH) n=2 Tax=Alicycliphilus denitrificans RepID=E8TT77_ALIDB
outer membrane chaperone Skp
Outer membrane chaperone Skp {ECO:0000313|EMBL:GAO27364.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_solid_1_scaffold_111_47
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48573..50870)
DNA (2298bp) protein (766aa)
Outer membrane protein assembly factor BamA n=2 Tax=Alicycliphilus denitrificans RepID=E8TT76_ALIDB rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
outer membrane protein assembly complex, yaet protein
SCNpilot_solid_1_scaffold_111_48
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50914..52278)
DNA (1365bp) protein (455aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
zinc metalloprotease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003714DF6 rbh
membrane-associated zinc metalloprotease
SCNpilot_solid_1_scaffold_111_49
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52380..53555)
DNA (1176bp) protein (392aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT74_ALIDB rbh
SCNpilot_solid_1_scaffold_111_50
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53552..54394)
DNA (843bp) protein (281aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria;
Phosphatidate cytidylyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGM2_ACIET rbh
phosphatidate cytidylyltransferase
SCNpilot_solid_1_scaffold_111_51
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54388..55140)
DNA (753bp) protein (251aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T521_ACIDE rbh
SCNpilot_solid_1_scaffold_111_52
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55192..55752)
DNA (561bp) protein (187aa)
ribosome recycling factor n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003614404 rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1268622 species="Bacteria;
ribosome recycling factor
SCNpilot_solid_1_scaffold_111_53
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55789..56508)
DNA (720bp) protein (240aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] id=12551926 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
uridylate kinase
SCNpilot_solid_1_scaffold_111_54
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56551..57447)
DNA (897bp) protein (299aa)
Elongation factor Ts n=2 Tax=Alicycliphilus denitrificans RepID=E8TT69_ALIDB rbh
translation elongation factor ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteri
SCNpilot_solid_1_scaffold_111_55
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(57533..58288)
DNA (756bp) protein (252aa)
30S ribosomal protein S2 n=2 Tax=Alicycliphilus denitrificans RepID=E8TT68_ALIDB rbh
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
SCNpilot_solid_1_scaffold_111_56
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58533..58964
DNA (432bp) protein (144aa)
RNA-binding S4 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TY67_ALIDB
RNA-binding S4 domain-containing protein {ECO:0000313|EMBL:GAO23693.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
RNA-binding S4 domain-containing protein
SCNpilot_solid_1_scaffold_111_57
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58971..59822)
DNA (852bp) protein (284aa)
hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003783F1F
Predicted hydrolases or acyltransferase {ECO:0000313|EMBL:GAD21323.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
alpha/beta hydrolase fold protein
SCNpilot_solid_1_scaffold_111_58
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59987..62158)
DNA (2172bp) protein (724aa)
hydroxybutyrate-dimer hydrolase (EC:3.1.1.22)
hydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003729F40 rbh
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:GAD21321.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
SCNpilot_solid_1_scaffold_111_59
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62217..63281)
DNA (1065bp) protein (355aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002376621 rbh
ABC transporter permease {ECO:0000313|EMBL:KJA09401.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;
inner-membrane translocator
Displaying items 31-60 of 95 in total

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