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SCNpilot_solid_1_scaffold_111

Search features with annotation key words

Displaying items 61-90 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_111_60
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63297..64298)
DNA (1002bp) protein (334aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Acidovorax sp. CF316 RepID=J0KJ95_9BURK rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJE51283.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
inner-membrane translocator
SCNpilot_solid_1_scaffold_111_61
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64443..65168)
DNA (726bp) protein (242aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAF5_ACIDE rbh
ABC transporter related protein {ECO:0000313|EMBL:EER58544.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax del
ABC transporter
SCNpilot_solid_1_scaffold_111_62
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65165..65935)
DNA (771bp) protein (257aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAF6_ACIDE rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJA09384.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
high-affinity branched-chain amino acidtransport ATP-binding protein livG
SCNpilot_solid_1_scaffold_111_63
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66080..67267)
DNA (1188bp) protein (396aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICD6_9BURK rbh
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFU46976.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
SCNpilot_solid_1_scaffold_111_64
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67400..68905)
DNA (1506bp) protein (502aa)
Fis family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023762C4 rbh
Transcriptional regulator {ECO:0000313|EMBL:GAD21315.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
pas modulated Fis family transcriptional regulator
SCNpilot_solid_1_scaffold_111_65
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68912..69424
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAT9_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33540.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
SCNpilot_solid_1_scaffold_111_66
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69435..70094)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3A7_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG91194.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_solid_1_scaffold_111_67
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70152..70514)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U2U2_ALCXX
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_solid_1_scaffold_111_68
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70582..71556)
DNA (975bp) protein (325aa)
2-nitropropane dioxygenase-like enzyme n=1 Tax=Acidovorax sp. CF316 RepID=J0KNW9_9BURK rbh
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:EJE52888.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
2-nitropropane dioxygenase
SCNpilot_solid_1_scaffold_111_69
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71612..72499)
DNA (888bp) protein (296aa)
Integral membrane protein DUF6 (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZML8_9ZZZZ
Permease {ECO:0000313|EMBL:GAN45738.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
permease
SCNpilot_solid_1_scaffold_111_70
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72689..77011)
DNA (4323bp) protein (1441aa)
Putative type II DNA modification enzyme n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WHG9_VEREI rbh
Putative type II DNA modification enzyme {ECO:0000313|EMBL:ABM57076.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source
putative type II DNA modification enzyme
SCNpilot_solid_1_scaffold_111_71
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77259..78833)
DNA (1575bp) protein (525aa)
alkyl hydroperoxide reductase subunit F (EC:1.6.99.3)
Alkyl hydroperoxide reductase, F subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUD1_ALIDB rbh
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:ADV00536.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
SCNpilot_solid_1_scaffold_111_72
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78933..79508)
DNA (576bp) protein (192aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:AEB84044.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AEB84044.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyclip
Peroxiredoxin n=2 Tax=Alicycliphilus denitrificans RepID=E8TUD2_ALIDB rbh
SCNpilot_solid_1_scaffold_111_73
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79714..80190
DNA (477bp) protein (159aa)
bacterioferritin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E78BC
bacterioferritin
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain A
SCNpilot_solid_1_scaffold_111_74
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80392..80721
DNA (330bp) protein (110aa)
flagellar transcriptional activator; K02403 flagellar transcriptional activator FlhD id=12550945 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
flagellar transcriptional activator; K02403 flagellar transcriptional activator FlhD Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
flagellar transcriptional activator
SCNpilot_solid_1_scaffold_111_75
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80738..81274
DNA (537bp) protein (179aa)
Flagellar transcriptional regulator FlhC n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBV8_ACIDE
transcriptional activator FlhC Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
transcriptional activator flhc
SCNpilot_solid_1_scaffold_111_76
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81280..81825)
DNA (546bp) protein (182aa)
hypothetical protein id=12551001 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_solid_1_scaffold_111_77
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81996..82331
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DPN5_METS0
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_111_78
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82442..85288)
DNA (2847bp) protein (949aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCA8_ACIET rbh
SCNpilot_solid_1_scaffold_111_79
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85372..86310
DNA (939bp) protein (313aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3X8_ALIDK rbh
SCNpilot_solid_1_scaffold_111_80
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86312..87127
DNA (816bp) protein (272aa)
Uroporphyrinogen-III synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3X7_ALIDK rbh
uroporphyrinogen-III synthase
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:AEB84038.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_solid_1_scaffold_111_81
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87117..88187
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9V8_ACISJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43033.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_solid_1_scaffold_111_82
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88208..89470
DNA (1263bp) protein (421aa)
HemY domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUE0_ALIDB rbh
HemY domain-containing protein
HemY domain protein {ECO:0000313|EMBL:ADV00545.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_solid_1_scaffold_111_83
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89579..89908
DNA (330bp) protein (110aa)
4Fe-4S ferredoxin; K05524 ferredoxin id=12552633 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
4Fe-4S ferredoxin; K05524 ferredoxin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
4Fe-4S ferredoxin
SCNpilot_solid_1_scaffold_111_84
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89915..90508)
DNA (594bp) protein (198aa)
Flp pilus assembly protein TadD n=1 Tax=Acidovorax sp. CF316 RepID=J1EGW4_9BURK
Flp pilus assembly protein TadD {ECO:0000313|EMBL:EJE51464.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
SCNpilot_solid_1_scaffold_111_85
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90526..90837)
DNA (312bp) protein (104aa)
Flp pilus assembly protein TadD n=1 Tax=Acidovorax sp. CF316 RepID=J1EGW4_9BURK
Flp pilus assembly protein TadD {ECO:0000313|EMBL:EJE51464.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
FecR protein
SCNpilot_solid_1_scaffold_111_86
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91170..92444
DNA (1275bp) protein (425aa)
allantoin permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003700F6E rbh
Purine-cytosine permease and related proteins {ECO:0000313|EMBL:GAD21639.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
cytosine/purines uracil thiamine allantoin permease
SCNpilot_solid_1_scaffold_111_87
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92516..93373)
DNA (858bp) protein (286aa)
Phosphomethylpyrimidine kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6V0_ACISJ rbh
phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ABM41975.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
SCNpilot_solid_1_scaffold_111_88
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93610..94731
DNA (1122bp) protein (374aa)
FAD dependent oxidoreductase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBG1_ACIAP
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADX46126.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
SCNpilot_solid_1_scaffold_111_89
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94744..94941
DNA (198bp) protein (66aa)
Sulfur carrier protein ThiS n=2 Tax=Acidovorax RepID=A1W6U8_ACISJ
thiamine biosynthesis protein this
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:ACM33393.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
Displaying items 61-90 of 95 in total

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