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SCNpilot_solid_1_scaffold_139

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Displaying items 151-180 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_139_148
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158477..159766)
DNA (1290bp) protein (430aa)
Homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:000025
Homogentisate 1,2-dioxygenase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PR89_9BURK
SCNpilot_solid_1_scaffold_139_149
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159806..160618)
DNA (813bp) protein (271aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thymidylate synthase (EC:2.1.1.45)
thymidylate synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FC371 rbh
SCNpilot_solid_1_scaffold_139_150
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160630..161076)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Burkholderia cenocepacia RepID=B4E7Q1_BURCJ
Toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:KCB41647.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" so
hypothetical protein
SCNpilot_solid_1_scaffold_139_151
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161073..161291)
DNA (219bp) protein (73aa)
AbrB family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L006_PSEAI
AbrB family transcriptional regulator {ECO:0000313|EMBL:KEH13423.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsu
hypothetical protein
SCNpilot_solid_1_scaffold_139_152
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161399..162826)
DNA (1428bp) protein (476aa)
FAD linked oxidase domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT5_ALIDB
fad linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADV00725.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_solid_1_scaffold_139_153
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162804..163223)
DNA (420bp) protein (140aa)
Membrane protein-like protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TM56_ACIAC
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABM32044.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citru
SCNpilot_solid_1_scaffold_139_154
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163260..164498
DNA (1239bp) protein (413aa)
UPF0761 membrane protein Alide_2997 n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT3_ALIDB rbh
ribonuclease bn
UPF0761 membrane protein Alide2_1450 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
SCNpilot_solid_1_scaffold_139_155
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164669..165352
DNA (684bp) protein (228aa)
Transcriptional regulator, TetR family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1E8_THIK1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADG30944.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (str
SCNpilot_solid_1_scaffold_139_156
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165349..167262
DNA (1914bp) protein (638aa)
Beta-lactamase domain-containing protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1E9_THIK1 rbh
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:ADG30945.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (s
SCNpilot_solid_1_scaffold_139_157
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167272..168900
DNA (1629bp) protein (543aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1F0_THIK1 rbh
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ADG30946.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (st
SCNpilot_solid_1_scaffold_139_158
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168947..171229
DNA (2283bp) protein (761aa)
Sulfatase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1F1_THIK1 rbh
sulfatase
Sulfatase {ECO:0000313|EMBL:ADG30947.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus interm
SCNpilot_solid_1_scaffold_139_159
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171250..172599
DNA (1350bp) protein (450aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1F2_THIK1 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADG30948.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain
SCNpilot_solid_1_scaffold_139_160
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172626..175472)
DNA (2847bp) protein (949aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I066_9BURK
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM25599.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_139_161
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175514..176554)
DNA (1041bp) protein (347aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Polaromonas sp. CF318 RepID=J3CUJ0_9BURK rbh
SCNpilot_solid_1_scaffold_139_162
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176589..177284
DNA (696bp) protein (232aa)
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=2 Tax=Alicycliphilus denitrificans RepID=E8U119_ALIDB rbh
SCNpilot_solid_1_scaffold_139_163
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177297..177944)
DNA (648bp) protein (216aa)
Glutaredoxin n=2 Tax=Alicycliphilus denitrificans RepID=E8U120_ALIDB
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AEB84774.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_solid_1_scaffold_139_164
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178050..180083)
DNA (2034bp) protein (678aa)
oligopeptidase A (EC:3.4.24.70)
oligopeptidase A n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F7B67 rbh
Zn-dependent oligopeptidases {ECO:0000313|EMBL:GAD24166.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
SCNpilot_solid_1_scaffold_139_165
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180116..180991)
DNA (876bp) protein (292aa)
Bifunctional protein FolD n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWK1_RAMTT rbh
folD; bifunctional methylenetetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolase rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tat
SCNpilot_solid_1_scaffold_139_166
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181022..181651)
DNA (630bp) protein (210aa)
LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B5BEA rbh
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:GAD24164.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
response regulator receiver
SCNpilot_solid_1_scaffold_139_167
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181664..184186)
DNA (2523bp) protein (841aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
Signal transduction histidine kinase n=2 Tax=Acidovorax sp. KKS102 RepID=Q1HAX1_9BURK rbh
bphP; multi-sensor signal transduction histidine kinase BphP
SCNpilot_solid_1_scaffold_139_168
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184348..187047
DNA (2700bp) protein (900aa)
aceE; pyruvate dehydrogenase subunit e1 (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Pyruvate dehydrogenase E1 component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIU9_ACIET rbh
SCNpilot_solid_1_scaffold_139_169
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187063..188721
DNA (1659bp) protein (553aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteob
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQ00_ACIAC rbh
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
SCNpilot_solid_1_scaffold_139_170
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188734..190557
DNA (1824bp) protein (608aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
Dihydrolipoamide dehydrogenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUR9_COMTE rbh
dihydrolipoamide dehydrogenase
SCNpilot_solid_1_scaffold_139_171
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190631..190975)
DNA (345bp) protein (115aa)
cupin n=1 Tax=Pseudomonas nitroreducens RepID=UPI0003615036
Cupin {ECO:0000313|EMBL:KJK02687.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
hypothetical protein
SCNpilot_solid_1_scaffold_139_172
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191114..192763)
DNA (1650bp) protein (550aa)
FAD-dependent oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI00035F0B79 rbh
FAD-dependent dehydrogenase {ECO:0000313|EMBL:EJL69228.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF
FAD dependent oxidoreductase
SCNpilot_solid_1_scaffold_139_173
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192784..193632)
DNA (849bp) protein (283aa)
UPI00039CB44C related cluster n=1 Tax=unknown RepID=UPI00039CB44C
Putative signal transduction protein {ECO:0000313|EMBL:GAD22132.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
putative signal transduction protein
SCNpilot_solid_1_scaffold_139_174
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194157..194606)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CUY4_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20420.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
SCNpilot_solid_1_scaffold_139_175
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194795..195451
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EL32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE52909.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.
hypothetical protein
SCNpilot_solid_1_scaffold_139_176
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195448..196716
DNA (1269bp) protein (423aa)
Replication initiation factor n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TPU4_ACIAC rbh
replication initiation factor
Replication initiation factor {ECO:0000313|EMBL:ABM32982.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citru
SCNpilot_solid_1_scaffold_139_177
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196741..197052
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TPU3_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32981.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
Displaying items 151-180 of 256 in total

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